Publications by: Marine Biology & Aquaculture
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Morais, Juliano, Tebbett, Sterling B., Morais Araujo, Renato A., and Bellwood, David R. (2024) Hot spots of bleaching in massive Porites coral colonies. Marine Environmental Research, 193. 106276.
Jones, Nicholas P., Pratchett, Morgan S., Milligan, Rosanna J., and Gilliam, David S. (2023) High incidence of partial colony mortality constrains realized growth for three coral species in southeast Florida. Marine Ecology Progress Series, 721. pp. 59-70.
Ford-Learner, Nicholas, Addison, Jane, and Smallhorn-West, Patrick (2024) Conservation and human rights: The public commitments of international conservation organizations. Conservation Letters. e13035. (In Press)
Moran, Megan N., Jones, D.B., Jensen, S.A., Marcoli, R., and Jerry, D. R. (2024) Optimising commercial traits through gene editing in aquaculture: Strategies for accelerating genetic improvement. Reviews in Aquaculture. (In Press)
Uthicke, Sven, Doyle, Jason R., Gomez Cabrera, Maria, Patel, Frances, McLatchie, Madi J., Doll, Peter C., Chandler, Josie F., and Pratchett, Morgan S. (2024) eDNA monitoring detects new outbreak wave of corallivorous seastar (Acanthaster cf. solaris) at Lizard Island, Great Barrier Reef. Coral Reefs. (In Press)
Messer, Lauren F., Bourne, David G., Robbins, Steven J., Clay, Megan, Bell, Sara C., McIlroy, Simon J., and Tyson, Gene W. (2024) A genome-centric view of the role of the Acropora kenti microbiome in coral health and resilience. Nature Communications, 15. 2902.
Sheaves, M., Baker, R., dos Santos Abrantes, K., Barnett, A., Bradley, M., Dubuc, A., Mattone, C., Sheaves, J., and Waltham, N. (2024) Consequences for nekton of the nature, dynamics, and ecological functioning of tropical tidally dominated ecosystems. Estuarine, Coastal and Shelf Science, 304. 108825.
Jerry, Emily M., Karnaneedi, Shaymaviswanathan, Ruethers, Thimo, Jerry, Dean R., Condon, Kelly, and Lopata, Andreas L. (2024) Allergen Diversity and Abundance in Different Tissues of the Redclaw Crayfish (Cherax quadricarinatus). Foods, 13 (2). 315.
Saleh, Alzayat, Sheaves, Marcus, Jerry, Dean, and Rahimi Azghadi, Mostafa (2024) Applications of deep learning in fish habitat monitoring: A tutorial and survey. Expert Systems with Applications, 238. 121841.
Lee, Calvin K.F., Nicholson, Emily, Duncan, Clare, Grantham, Hedley, Keith, David A., Tizard, Rob, and Murray, Nicholas J. (2024) Assessing the conservation status of mangroves in Rakhine, Myanmar. Aquatic Conservation: Marine and Freshwater Ecosystems, 34 (1). e4058.
Price, Jeff, Warren, Rachel, Forstenhäusler, Nicole, Jenkins, Rhosanna, and Graham, Erin (2024) Assessing the potential risks of climate change on the natural capital of six countries resulting from global warming of 1.5 to 4 °C above pre-industrial levels. Climatic Change, 177. 46.
Atwood, Trisha B., Romanou, Anastasia, DeVries, Tim, Lerner, Paul E., Mayorga, Juan S., Bradley, Darcy, Cabral, Reniel B., Schmidt, Gavin A., and Sala, Enric (2024) Atmospheric CO2 emissions and ocean acidification from bottom-trawling. Frontiers in Marine Science, 10. 1125137.
Scardifield, Kate, McLean, Nahum, Kuzhiumparambil, Unnikrishnan, Ralph, Peter J., Neveux, Nicolas, Isaac, Geoff, and Schork, Tim (2024) Biomasonry products from macroalgae: A design driven approach to developing biomaterials for carbon storage. Journal of Applied Phycology, 36. pp. 935-950.
Pratchett, Morgan S., Chandler, Josie F., Choukroun, Severine M., Doll, Peter C., Lang, Bethan J., Kwong, Sarah, Chen, Carla C.M., Emslie, Mike J., Caballes, Ciemon F., Uthicke, Sven, and Matthews, Sam A. (2024) Biophysical Processes Involved in the Initiation and Spread of Population Irruptions of Crown-of-Thorns Starfish on the Great Barrier Reef. In: Wolanski, Eric, and Kingsford, Michael J., (eds.) Oceanographic Processes of Coral Reefs: Physical and Biological Links in the Great Barrier Reef. CRC Press, Boca Raton, Florida, USA, pp. 290-305.
Anthony, Colin J., McDermott, Grace, Lock, Colin, Miller, Therese, Bentlage, Bastian, and Raymundo, Laurie J. (2024) Depth-independent phenotypic variation of massive Porites coral color morphs. Marine Ecology, 45 (1). e12788.
Arbon, P.M., Andrade Martinez, Maria, Garrett, M. Andrade, Jerry, D.R., and Condon, K. (2024) Determining patterns of tissue tropism for IHHNV, GAV and YHV-7 infection in giant black tiger shrimp (Penaeus monodon) using real-time RT-qPCR. Aquaculture, 584. 740680.
Kingsford, Michael J., and Wolanski, Eric (2024) The Emergence of Biophysical Sciences for the Great Barrier Reef. In: Wolanski, Eric, and Kingsford, Michael J., (eds.) Oceanographic Processes of Coral Reefs. CRC Press, Boca Raton, FL, USA, pp. 3-8.
Lechene, Marine A.A., Figueira, Will F., Murray, Nicholas J., Aston, Eoghan A., Gordon, Sophie E., and Ferrari, Renata (2024) Evaluating error sources to improve precision in the co-registration of underwater 3D models. Ecological Informatics, 81. 102632.
Lutzenkirchen, Lucas L., Duce, Stephanie J., and Bellwood, David R. (2024) Exploring benthic habitat assessments on coral reefs: a comparison of direct field measurements versus remote sensing. Coral Reefs, 43. pp. 265-280.
Barnett, Adam, Jaine, Fabrice R.A., Bierwagen, Stacy L., Lubitz, Nicolas, Abrantes, Kátya, Heupel, Michelle R., Harcourt, Robert, Huveneers, Charlie, Dwyer, Ross G., Udyawer, Vinay, Simpfendorfer, Colin A., Miller, Ingo B., Scott-Holland, Tracey, Kilpatrick, Carley S., Williams, Samuel M., Smith, Daniel, Dudgeon, Christine L., Hoey, Andrew S., Fitzpatrick, Richard, Osborne, Felicity E., Smoothey, Amy F., Butcher, Paul A., Sheaves, Marcus, Fisher, Eric E., Svaikauskas, Mark, Ellis, Megan, Kanno, Shiori, Cresswell, Benjamin J., Flint, Nicole, Armstrong, Asia O., Townsend, Kathy A., Mitchell, Jonathan D., Campbell, Matthew, Peddemors, Victor M., Gustafson, Johan A., and Currey-Randall, Leanne M. (2024) From little things big things grow: enhancement of an acoustic telemetry network to monitor broad-scale movements of marine species along Australia’s east coast. Movement Ecology, 12. 31.
Hair, Cathy, Foale, Simon, Kinch, Jeff, Daniels, Nicholas, Minimulu, Peter, and Southgate, Paul C. (2024) Future prospects for sea cucumber mariculture in Papua New Guinea and the Pacific Islands. In: Mercier, Annie, Hamel, Jean François, Suhrbier, Andrew D., and Pearce, Christopher M., (eds.) The World of Sea Cucumbers: Challenges, Advances, and Innovations. Elsevier, pp. 801-817.
Wolanski, Eric, and Kingsford, Michael J. (2024) Great Barrier Reef Biophysics. In: Wolanski, Eric, and Kingsford, Michael J., (eds.) Oceanographic Processes of Coral Reefs. CRC Press, Boca Raton, FL, USA, pp. 438-451.
Álvarez-Romero, Jorge G., Adams, Vanessa M., Ban, Natalie C., Mills, Morena, and Visconti, Piero (2024) Honoring the legacy of a conservation champion: Bob Pressey (1953-2023). Conservation Biology, 38 (1). e14168.
Garcias-Bonet, Neus, Roik, Anna, Tierney, Braden, García, Francisca C., Villela, Helena D.M., Dungan, Ashley M., Quigley, Kate M., Sweet, Michael, Berg, Gabriele, Gram, Lone, Bourne, David G., Ushijima, Blake, Sogin, Maggie, Hoj, Lone, Duarte, Gustavo, Hirt, Heribert, Smalla, Kornelia, Rosado, Alexandre S., Carvalho, Susana, Thurber, Rebecca Vega, Ziegler, Maren, Mason, Christopher E., van Oppen, Madeleine J.H., Voolstra, Christian R., and Peixoto, Raquel S. (2024) Horizon scanning the application of probiotics for wildlife. Trends in Microbiology, 32 (3). pp. 252-269.
Morais, Juliano, Tebbett, Sterling B., Morais, Renato A., and Bellwood, David R. (2024) Hot spots of bleaching in massive Porites coral colonies. Marine Environmental Research, 193. 106276.
Abrantes, K., Wildermann, N., Miller, I.B., Hamann, M., Limpus, C.J., Hof, C.A. Madden, Bell, I., Sheaves, M., and Barnett, A. (2024) Intraspecific variability in flatback turtle habitat use: δ15N as an indicator of foraging locations. Endangered Species Research, 53. pp. 167-180.
Pell, T.J., McClure, E.C., Emslie, M.J., and Hoey, A.S. (2024) Limited susceptibility of Lobophora to browsing fishes on inshore reefs of the Great Barrier Reef. Coral Reefs, 43. pp. 5-17.
Ritter, Carmen J., and Bourne, David G. (2024) Marine amphipods as integral members of global ocean ecosystems. Journal of Experimental Marine Biology and Ecology, 572. 151985.
Cohen, Philippa J., Tholan, Brittany, Dean-Fitz, Kama, Sisir, Pradhan, Solis Rivera, Vivienne, and Govan, Hugh (2024) Marine, Coastal and Shoreline Tenure. Report. Meridian Institute, USA.
Mason, Benjamin, Hayward, David C., Moya, Aurelie, Cooke, Ira, Sorenson, Alanna, Brunner, Ramona, Andrade Rodriguez, Natalia, Huerlimann, Roger, Bourne, David G., Schaeffer, Patrick, Grinblat, Mila, Ravasi, Timothy, Ueda, Nobuo, Tang, Sen-Lin, Ball, Eldon E., and Miller, David J. (2024) Microbiome manipulation by corals and other Cnidaria via quorum quenching. Current Biology, 34. pp. 3226-3232.
Mather, Rachel, Chin, Andrew, Rigby, Cassandra, Cooke, Steven J., Fahmi, , Haque, Alifa Bintha, Mizrahi, Meira, and Grant, Michael I. (2024) Murky waters: Assessing the vulnerabilities of Indo-West Pacific non-marine elasmobranchs to inform future conservation planning priorities. Aquatic Conservation: Marine and Freshwater Ecosystems, 34 (1). e4039.
Wolanski, Eric, and Kingsford, Michael J. (2024) Oceanographic Processes of Coral Reefs: Physical and Biological Links in the Great Barrier Reef. CRC Press, Boca Raton, FL, USA.
Wolanski, Eric, Kingsford, Michael J., Lambrechts, Jonathan, and Marmorino, George (2024) The Physical Oceanography of the Great Barrier Reef:. In: Wolanski, Eric, and Kingsford, Michael J., (eds.) Oceanographic Processes of Coral Reefs. CRC Press, Boca Raton, FL, USA, pp. 9-34.
Francis, Robin K., Tostevin, Genevieve, Barbasch, Tina, Branconi, Rebecca, Srinivasan, Maya, Jones, Geoffrey P., and Buston, Peter M. (2024) Positive spatial autocorrelation in three habitat quality indicators sets the stage for evolution of adaptive dispersal plasticity in a coral reef fish. Coral Reefs, 43. pp. 69-78.
Mohammadi, Zohre, Bhati, Abhishek Singh, and Jerry, Dean (2024) A Pre-Science Style Model of Aquaculture Tourism Businesses. Tourism Planning & Development, 21 (2). pp. 245-253.
Webster, Emily, Duce, Stephanie, Hamann, Mark, Murray, Nicholas, Shimada, Takahiro, and Limpus, Colin (2024) Should I stay or should I go? The influence of environmental conditions on green turtle residence time and outward transit in foraging areas. Marine Biology, 171. 144.
Bellwood, David R., Bellwood, Orpha, Bellwood, Hannah R., and Bellwood, Oliver R. (2024) Sixteenth century recessed armour: evaluating links with the Spanish Armada. Arms and Armour, 21 (1). pp. 48-78.
Neil, Rachel C., Barton, Jonathan A., Dougan, Winona, Dworjanyn, Symon, Heyward, Andrew, Mos, Benjamin, Bourne, David G., and Humphrey, Craig (2024) Size matters: Microherbivores make a big impact in coral aquaculture. Aquaculture, 581. 740402.
Marzonie, Magena R., Nitschke, Matthew R., Bay, Line K., Bourne, David G., and Harrison, Hugo B. (2024) Symbiodiniaceae diversity varies by host and environment across thermally distinct reefs. Molecular Ecology, 33 (9). e17342.
Cleguer, Christophe, Garrigue, Claire, Fuentes, Mariana M.P.B., Hamann, Mark, Payri, Claude, and Marsh, Helene (2024) Temporal changes in habitat use by dugongs in a spatially restricted coral reef environment. Pacific Conservation Biology, 30 (2). PC23036.
Arbon, P.M., Andrade Martinez, M., Jerry, D.R., and Condon, K. (2024) Towards a 'systems' approach for viral challenge experiments in shrimp: Reporting guidelines for publication. Reviews in Aquaculture, 16 (2). pp. 923-941.
Siddiqi, Aliya C., Bergseth, Brock J., Diedrich, Amy, and Chin, Andrew (2024) Understanding the perceived conservation benefits of shark-marine tourism in the Global South. Marine Policy, 161. 105995.
Sheaves, M., Mattone, C., Barnett, A., Abrantes, K., Bradley, M., Sheaves, A., Sheaves, J., and Waltham, N.J. (2024) Whale sharks as oceanic nurseries for Golden Trevally. Pacific Conservation Biology, 30 (1). PC23004.
Voolstra, Christian R., Raina, Jean Baptiste, Dörr, Melanie, Cárdenas, Anny, Pogoreutz, Claudia, Silveira, Cynthia B., Mohamed, Amin R., Bourne, David G., Luo, Haiwei, Amin, Shady A., and Peixoto, Raquel S. (2024) The coral microbiome in sickness, in health and in a changing world. Nature Reviews Microbiology, 22. pp. 460-475.
Willis-Norton, Ellen, Mangin, Tracey, Schroeder, Donna, Cabral, Reniel B., and Gaines, Steven D. (2024) A synthesis of socioeconomic and sociocultural indicators for assessing the impacts of offshore renewable energy on fishery participants and fishing communities. Marine Policy, 161. 106013.
Pytka, J.M., Kyne, P.M., Carlson, J.K., Wosnick, N., and Jabado, R.W. (2024) A tangled web: global review of fishing interactions with rhino rays. Reviews in Fish Biology and Fisheries, 34. pp. 131-160.
Intriago, Pablo, Medina, Andres, Espinoza, Jorge, Enriquez, Xavier, Arteaga, Kelly, Aranguren, Luis Fernando, Shinn, Andrew P., and Romero, Xavier (2023) Acute mortality of Penaeus vannamei larvae in farm hatcheries associated with the presence of Vibrio sp. carrying the VpPirAB toxin genes. Aquaculture International, 31. pp. 3363-3382.
Harrison, H.B., Drane, L., Cresswell, B.J., Evans, R.D., Galbraith, G.F., Srinivasan, M., Taylor, B.M., Williamson, D.H., and Jones, G.P. (2023) Ageing of juvenile coral grouper (Plectropomus maculatus) reveals year-round spawning and recruitment: implications for seasonal closures. Proceedings of the Royal Society of London Series B, Biological Sciences, 290. 20230584.
Donelson, Jennifer M., Romans, Pascal, Yamanaka, Sakuto, Kinoshita, Masato, and Roux, Natasha (2023) Anemonefish Husbandry. In: Laudet, Vincent, and Ravasi, Timothy, (eds.) Evolution, Development and Ecology of Anemonefishes: Model Organisms for Marine Science. CRC Press, Boca Raton, Florida, USA, pp. 237-251.
Digamadulla, Dayananda Senathera, Asoka, Jayasinghe M., Jones, Clive, Jayasinghe‐Mudalige, Udith K., Wijenayake, W. M. H. Kelum, Amarasinghe, Upali S., and de Croos, M. D. S. T. (2023) Appraisal of culture‐based fisheries of giant freshwater prawn (Macrobrachium rosenbergii, De Man, 1879) in reservoirs of Sri Lanka. Aquaculture, Fish and Fisheries, 3 (1). pp. 81-95.
Miller, Michaela E., Motti, Cherie A., Hamann, Mark, and Kroon, Frederieke J. (2023) Assessment of microplastic bioconcentration, bioaccumulation and biomagnification in a simple coral reef food web. Science of the Total Environment, 858. 159615.
Hutson, Kate S., Davidson, Ian C., Bennett, Jerusha, Poulin, Robert, and Cahill, Patrick L. (2023) Assigning cause for emerging diseases of aquatic organisms. Trends in Microbiology, 31 (7). pp. 681-691.
Monk, Christopher T., Power, Michael, Freitas, Carla, Harrison, Philip M., Heupel, Michelle, Kuparinen, Anna, Moland, Even, Simpfendorfer, Colin, Villegas-Ríos, David, and Olsen, Esben M. (2023) Atlantic cod individual spatial behaviour and stable isotope associations in a no-take marine reserve. Journal of Animal Ecology, 92 (12). pp. 2333-2347.
Walker, S.E., Sheaves, M., and Waltham, N.J. (2023) Barriers to Using UAVs in Conservation and Environmental Management: A Systematic Review. Environmental Management, 71. pp. 1052-1064.
Wright, Raven M., Beaman, Robin J., Daniell, James, Bridge, Tom C.L., Pall, Jodie, and Webster, Jody M. (2023) Benthic communities of the lower mesophotic zone on One Tree shelf edge, southern Great Barrier Reef, Australia. Marine and Freshwater Research, 74 (13). pp. 1178-1192.
Tebbett, Sterling B., Connolly, Sean R., and Bellwood, David R. (2023) Benthic composition changes on coral reefs at global scales. Nature Ecology and Evolution, 7 (1). pp. 71-81.
Tebbett, Sterling B., Schlaefer, Jodie A., Bowden, Casey L., Collins, William P., Hemingson, Christopher R., Ling, Scott D., Morais, Juliano, Morais, Renato A., Siqueira, Alexandre C., Streit, Robert P., Swan, Sam, and Bellwood, David R. (2023) Bio-physical determinants of sediment accumulation on an offshore coral reef: A snapshot study. Science of the Total Environment, 895. 165188.
Frøland Steindal, Inga A., Yamamoto, Yoshiyuki, and Whitmore, David (2023) Blind fish have cells that see light. Proceedings of the Royal Society of London B: Biological Sciences, 290 (2002). 20230981.
Sutcliffe, Sarah, Lau, Jacqueline D., Barnes, MicheleL., Mbaru, Emmanuel, Wade, Eric, Hungito, Wilda, Muly, Innocent Mulwodo, Wanyonyi, Stephen, Muthiga, Nyawira A., Cohen, Philippa J., and Cinner, Joshua (2023) COVID-19 impacts on food systems in fisheries-dependent island communities. Ecology and Society, 28 (1). 1.
Marcoli, Roberta, Symonds, Jane E., Walker, Seumas P., Battershill, Christopher N., and Bird, Steve (2023) Characterising the Physiological Responses of Chinook Salmon (Oncorhynchus tshawytscha) Subjected to Heat and Oxygen Stress. Biology, 12. 1342.
Pei, Yingbing, Deng, Zhixiong, Zhang, Xiuping, Blair, David, Hu, Wei, and Yin, Mingbo (2023) Chromosome-scale genome assembly of the freshwater cladoceran crustacean Chydorus sphaericus: A resource for discovery of genes responsive to ecological challenges. Aquatic Toxicology, 260. 106565.
Bergseth, Brock J., Arias, Adrian, Barnes, Michele L., Caldwell, Iain, Datta, Amber, Gelcich, Stefan, Ham, Sam H., Lau, Jacqueline D., Ruano-Chamorro, Cristina, Smallhorn-West, Patrick, Weekers, Damian, Zamborain-Mason, Jessica, and Cinner, Joshua E. (2023) Closing the compliance gap in marine protected areas with human behavioural sciences. Fish and Fisheries, 24. pp. 695-704.
Hutchings, Marissa J., Hamann, Mark, Smithers, Scott G., Daley, Emily, and Birtles, R. Alastair (2023) Color pattern complexity in dwarf minke whales (Balaenoptera acutorostrata) of the northern Great Barrier Reef of Australia. Marine Mammal Science, 39 (3). pp. 780-793.
De Vos, Bas C., Cyrus, Mark D., Macey, Brett M., Batik, Theodore, and Bolton, John J. (2023) Combining computer vision and standardised protocols for improved measurement of live sea urchins for research and industry. Aquaculture, Fish and Fisheries, 3 (6). pp. 507-517.
Shen, Xueyan, Yáñez, José M., Gomes, Giana, Poon, Zhi Weng Josiah, Foster, Derick, Alarcon, Jorge, and Domingos, Jose A. (2023) Comparative gonad transcriptome analysis in cobia (Rachycentron canadum). Frontiers in Genetics, 14. 1128943.
Hermanto, B., Bourne, D.G., and Smith, H. (2023) Comparative image analysis approaches to assess ecological effects of macroalgal removal on inshore reefs of Magnetic Island, Australia. In: IOP Conference Series: Earth and Environmental Science (1137) 012052. From: MarBioUtiCoM: International Seminar on Marine Biodiversity, Utilization, Conservation and Management, 8-9 August 2022, Online.
Chew, Xian Zhe, Gibson-Kueh, Susan, Jerry, Dean R., and Shen, Xueyan (2023) Comparison of intestinal bacterial communities in asymptomatic and diseased Asian seabass (Lates calcarifer) with chronic enteritis and mixed bacterial infections. Aquaculture, 572. 739516.
Diggins, Rebecca L., Grimm, Jessica, Mendez, Diana, Jones, Karina, Hamann, Mark, Bell, Ian, and Ariel, Ellen (2023) Confirmed feasibility of a satellite tracker attachment method on small juvenile hawksbill turtles Eretmochelys imbricata. Marine Ecology Progress Series, 704. pp. 119-130.
Pacoureau, Nathan, Carlson, John K., Kindsvater, Holly K., Rigby, Cassandra L., Winker, Henning, Simpfendorfer, Colin A., Charvet, Patricia, Pollom, Riley A., Barreto, Rodrigo, Samantha Sherman, C., Talwar, Brendan S., Skerritt, Daniel J., Rashid Sumaila, U., Matsushiba, Jay H., VanderWright, Wade J., Yan, Helen F., and Dulvy, Nicholas K. (2023) Conservation successes and challenges for wide-ranging sharks and rays. Proceedings of the National Academy of Sciences of the United States of America, 120 (5). e2216891120.
Lubitz, Nicolas, Daly, Ryan, Filmalter, John D., Sheaves, Marcus, Cowley, Paul D., Naesje, Tor F., and Barnett, Adam (2023) Context drives movement patterns in a mobile marine predator. Movement Ecology, 11. 28.
Hoey, A.S., Burn, D., Chandler, J.F., Huertas, V., Cresswell, B.J., Galbraith, G.F., and McClure, E.C. (2023) Coral Sea Marine Park Coral Reef Health Survey 2023. Report. Parks Australia, Townsville, QLD, Australia.
Cresswell, B.J., Galbraith, G.F., Harrison, H.B., McCormick, M.I., and Jones, G.P, (2023) Coral reef pinnacles act as ecological magnets for the abundance, diversity and biomass of predatory fishes. Marine Ecology Progress Series, 717. pp. 143-156.
Chen, Xuelei, Xu, Tian, Dowse, Harold B., Tao, Yi, Zeng, Chaoshu, Zhao, Fanyi, Ye, Haihui, and Guo, Donghui (2023) Correlation between transport and moulting of catadromous crab megalopae: The effects of starvation on rhythmic vertical migration. Marine and Freshwater Behaviour and Physiology, 56 (1-2). pp. 1-18.
McGowan, Alexandra M., Lanyon, Janet M., Clark, Nicholas, Blair, David, Marsh, Helene, Wolanski, Eric, and Seddon, Jennifer M. (2023) Cryptic marine barriers to gene flow in a vulnerable coastal species, the dugong (Dugong dugon). Marine Mammal Science, 39 (3). pp. 918-939.
Douglas, Sophia R.L., Tebbett, Sterling B., Choukroun, Severine, Goatley, Christopher H.R., and Bellwood, David R. (2023) Depth stratified light trap sampling reveals variation in the depth distribution of late-stage cryptobenthic reef fish larvae. Coral Reefs, 42 (2). pp. 507-512.
Önal, Hayri, Pressey, Robert L., Kerley, Graham I.H., and Ridges, Malcolm (2023) Designing an Extensive Conservation Reserve Network with Economic, Ecological and Spatial Criteria. Environmental Modeling and Assessment, 28. pp. 585-598.
Vu, Nga T.T., Jerry, Dean R., Edmunds, Richard C., Jones, David B., and Zenger, Kyall R. (2023) Development of a global SNP resource for diversity, provenance, and parentage analyses on the Indo-Pacific giant black tiger shrimp (Penaeus monodon). Aquaculture, 563 (1). 738890.
Smith, Hillary A., Chen, Carla C. M., Pollock, F. Joseph, Re, Morgan, Willis, Bette L., and Bourne, David G. (2023) Drivers of coral mortality in non-acute disturbance periods. Marine Ecology Progress Series, 717. pp. 37-50.
Xu, Tian, and Zeng, Chaoshu (2023) Effects of salinity on larval survival and development of the decorator crab Camposcia retusa and food consumption patterns of megalopae. Aquaculture, 562. 738753.
Cabral, Reniel B., Geronimo, Rollan C., Mamauag, Samuel S., Silva, Juan A., Mancao, Roquelito H., and Atrigenio, Michael P. (2023) Ensuring Aquatic Food Security in the Philippines. The Philippine Journal of Fisheries, 30 (2). pp. 298-313.
Cork, Steven, Alexandra, Carla, Alvarez-Romero, Jorge G., Bennett, Elena M., Berbés-Blázquez, Marta, Bohensky, Erin, Bok, Barbara, Costanza, Robert, Hashimoto, Shizuka, Hill, Rosemary, Inayatullah, Sohail, Kok, Kasper, Kuiper, Jan J., Moglia, Magnus, Pereira, Laura, Peterson, Garry, Weeks, Rebecca, and Wyborn, Carina (2023) Exploring Alternative Futures in the Anthropocene. Annual Review of Environment and Resources, 48. pp. 25-54.
Kemink, Kaylan, Diedrich, Amy, Adams, Vanessa M., and Pressey, Robert L. (2023) Exploring motives for participation in a perpetual easement program: Going beyond financial incentives. Biological Conservation, 284. 110193.
Candebat, Caroline Lordes, Eddie, Thibault, Marc, Adrien Francois, Fernando, Fernando, and Nankervis, Leo (2023) Exploring the physiological plasticity of giant grouper (Epinephelus lanceolatus) to dietary sulfur amino acids and taurine to measure dietary requirements and essentiality. Fish Physiology and Biochemistry, 49. pp. 829-851.
Sahidhir, Ibnu, Syahrul, , Syafrizal, , Dewiyanti, Irma, Jones, Clive M., and Rimmer, Michael A. (2023) Feeding management and appraisal of recirculating aquaculture system for spiny lobster Panulirus spp. weaning. In: E3S Web of Conferences (442) 02020. From: ISFFS 2023: 2nd International Seminar on Fish and Fisheries Sciences, 6-7 June 2023, Denpasar-Bali, Indonesia.
Baird, Andrew, Prior, Susan, Bridge, Thomas, and Cowman, Peter (2023) First records of coral spawning on Norfolk Island. Galaxea, Journal of Coral Reef Studies, 25 (1). pp. 3-4.
Virdin, John, Basurto, Xavier, Nico, Gianluigi, Harper, Sarah, del Mar Mancha-Cisneros, Maria, Vannuccini, Stefania, Ahern, Molly, Anderson, Christopher M., Funge-Smith, Simon, Gutierrez, Nicolas L., Mills, David J., and Franz, Nicole (2023) Fishing for subsistence constitutes a livelihood safety net for populations dependent on aquatic foods around the world. Nature Food, 4. pp. 874-885.
Eustache, Kim B., Boissin, Émilie, Tardy, Céline, Bouyoucos, Ian A., Rummer, Jodie L., and Planes, Serge (2023) Genetic evidence for plastic reproductive philopatry and matrotrophy in blacktip reef sharks (Carcharhinus melanopterus) of the Moorea Island (French Polynesia). Scientific Reports, 13. 14913.
Lau, Sally C. Y., Wilson, Nerida G., Golledge, Nicholas R., Naish, Tim R., Watts, Phillip C., Silva, Catarina N. S., Cooke, Ira R., Allcock, A. Louise, Mark, Felix C., Linse, Katrin, and Strugnell, Jan M. (2023) Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial. Science, 382. pp. 1384-1389.
Lau, Sally C.Y., Strugnell, Jan M., Sands, Chester J., Silva, Catarina N.S., and Wilson, Nerida G. (2023) Genomic insights of evolutionary divergence and life histories innovations in Antarctic brittle stars. Molecular Ecology, 32 (13). pp. 3382-3402.
Lemke, L.R., and Simpfendorfer, C.A. (2023) Gillnet size selectivity of shark and ray species from Queensland, Australia. Fisheries Management and Ecology, 30 (3). pp. 300-309.
Giri, Nyoman Adiasmara, Irvin, Simon, Haryanti, , Sudewi, , Selamet, Bejo, Jones, Clive M., and Mujiono, (2023) Growth Response of Lobster Panulirus homarus Reared in Tanks and in Floating Net Cages Fed with Compound and Fresh Feed. Sains Malaysiana, 52 (10). pp. 2747-2759.
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Kidgell, Joel T., de Nys, Rocky, Paul, Nicholas A., and Roberts, David A. (2014) The sequential application of macroalgal biosorbents for the bioremediation of a complex industrial effluent. PLoS ONE, 9 (7). e101309.
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Carl, Christina, de Nys, Rocky, and Paul, Nicholas A. (2014) The seeding and cultivation of a tropical species of filamentous ulva for algal biomass production. PLoS ONE, 9 (6). e98700. pp. 1-9.
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Abdul Wahab, M., De Nys, R., Webster, N., and Whalan, S. (2014) Phenology of sexual reproduction in the common coral reef sponge, Carteriospongia foliascens. Coral Reefs, 33 (2). pp. 381-394.
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Abdul Wahab, Muhammad Azmi, de Nys, Rocky, Webster, Nicole, and Whalan, Steve (2014) Larval behaviours and their contribution to the distribution of the intertidal coral reef sponge Carteriospongia foliascens. PLoS ONE, 9 (5). e98181. pp. 1-13.
Carl, Christina, de Nys, Rocky, Lawton, Rebecca J., and Paul, Nicholas A. (2014) Methods for the induction of reproduction in a tropical species of filamentous Ulva. PLoS ONE, 9 (5). e97396. pp. 1-10.
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Abdul Wahab, Muhammad, Fromont, J., Whalan, S., Webster, N., and Andreakis, N. (2014) Combining morphometrics with molecular taxonomy: how different are similar foliose keratose sponges from the Australian tropics? Molecular Phylogenetics and Evolution, 73. pp. 23-39.
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Welsh, Stuart A., Jerry, Dean R., and Burrows, Damien W. (2014) A new species of freshwater eel-tailed catfish of the genus Tandanus (Teleostei: Plotosidae) from the wet tropics region of Eastern Australia. Copeia, 1. pp. 136-142.
Shimazu, Takeshi, Cribb, Thomas H., Miller, Terrence L., Urabe, Misako, Van Ha, Nguyen, Thi Binh, Tran, and Shed'ko, Marina B. (2014) Revision of Isoparorchis Southwell, 1913 (Digenea, Hemiuroidea, Isoparorchiidae), parasites of the air bladder of freshwater catfishes: a molecular and morphological study. Bulletin of National Museum of Natural Science, Series A, 40 (1). pp. 15-51.
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Chivers, Douglas P., McCormick, Mark I., Nilsson, Göran E., Munday, Philip L., Watson, Sue-Ann, Meekan, Mark, Mitchell, Matthew D., Corkill, Katherine C., and Ferrari, Maud C.O. (2014) Impaired learning about predators and lower survival under elevated CO2: a consequence of neurotransmitter interference. Global Change Biology, 20 (2). pp. 515-522.
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Angell, Alex R., Mata, Leonardo, de Nys, Rocky, and Paul, Nicholas A. (2014) Variation in amino acid content and its relationship to nitrogen content and growth rate in Ulva ohnoi (Chlorophyta). Journal of Phycology, 50 (1). pp. 216-226.
Domenici, Paolo, Allan, Bridie J.M., Watson, Sue-Ann, McCormick, Mark I., and Munday, Philip L. (2014) Shifting from right to left: the combined effect of elevated CO2 and temperature on behavioural lateralization in a coral reef fish. PLoS One, 9 (1). e87969. pp. 1-6.
Paul, Nicholas A., Svensson, Carl Johan, de Nys, Rocky, and Steinberg, Peter D. (2014) Simple growth patterns can create complex trajectories for the ontogeny of constitutive chemical defences in seaweeds. PLoS ONE, 9 (1). e86893. pp. 1-10.
Taylor, Brett M. (2014) Drivers of protogynous sex change differ across spatial scales. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1775). 20132423. pp. 1-8.
Machado, Lorenna, Magnusson, Marie, Paul, Nicholas A., de Nys, Rocky, and Tomkins, Nigel (2014) Effects of marine and freshwater macroalgae on in vitro total gas and methane production. PLoS ONE, 9 (1). e85289. pp. 1-11.
Frisch, Ashley J., Ireland, Matthew, and Baker, Ronald (2014) Trophic ecology of large predatory reef fishes: energy pathways, trophic level, and implications for fisheries in a changing climate. Marine Biology, 161 (1). pp. 61-73.
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Johansen, Jacob L. (2014) Quantifying water flow within aquatic ecosystems using load cell sensors: a profile of currents experienced by coral reef organisms around Lizard Island, Great Barrier Reef, Australia. PLoS ONE, 9 (1). e83240. pp. 1-9.
von der Heyden, Sophie, Beger, Maria, Toonen, Robert J., van Herwerden, Lynne, Juinio-Meñez, Marie Antonette, Ravago-Gotanco, Rachel, Fauvelot, Cecile, and Bernardi, Giacomo (2014) The application of genetics to marine management and conservation: examples from the Indo-Pacific. Bulletin of Marine Science, 90 (1). pp. 123-158.
Pollock, F. Joseph, Wood-Charlson, Elisha M., van Oppen, Madeleine J.H., Bourne, David G., Willis, Bette L., and Weynberg, Karen D. (2014) Abundance and morphology of virus-like particles associated with the coral Acropora hyacinthus differ between healthy and white syndrome-infected states. Marine Ecology - Progress Series, 510. pp. 39-43.
Bowden, A.J., Gardiner, N.M., Couturier, C.S., Stecyk, J.A.W, Nilsson, G.E., Munday, P.L., and Rummer, J.L. (2014) Alterations in gill structure in tropical reef fishes as a result of elevated temperatures. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 175. pp. 64-71.
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Davis, Ben, Mattone, Carlo, and Sheaves, Marcus (2014) Bottom-up control regulates patterns of fish connectivity and assemblage structure in coastal wetlands. Marine Ecology Progress Series, 500. pp. 175-186.
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Kan, Tao, Grierson, Scott, De Nys, Rocky, and Strezov, Vladimir (2014) Comparative assessment of the thermochemical conversion of freshwater and marine micro- and macroalgae. Energy & Fuels, 28 (1). ef401568s. pp. 104-114.
Taylor, B.M., and Choat, J.H. (2014) Comparative demography of commercially important parrotfish species from Micronesia. Journal of Fish Biology, 84 (2). pp. 383-402.
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Sheaves, Marcus, Abrantes, Kátya G., and Johnston, Ross (2014) Deluge Inlet, a pristine small tropical estuary in north-eastern Australia. In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 261-275.
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Naidu, Suwastika, Chand, Anand, and Southgate, Paul (2014) Determinants of innovation in the handicraft industry of Fiji and Tonga: an empirical analysis from a tourism perspective. Journal of Enterprising Communities, 8 (4). pp. 318-330.
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De Jesus-Ayson, Evelyn Grace, Ayson, Felix G., and Thepot, Valentin (2014) Early development and seed production of Asian seabass, Lates calcarifer. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 16-30.
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Linn, Saw Mya, Ishika, Manaba, Koshio, Shunsuke, Yokoyama, Saichiro, Murata, Takuya, Hamasaki, Yuta, and Nankervis, Leo (2014) Effects of replacing fish meal with plant protein on growth performance, feed utilization and oxidative condition of red sea bream Pagrus major. Aquaculture Science, 62 (4). pp. 341-352.
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Miller, Penny A., Fitch, Alison J., Gardner, Michael, Hutson, Kate S., and Mair, Graham (2011) Genetic population structure of Yellowtail Kingfish (Seriola lalandi) in temperate Australasian waters inferred from microsatellite markers and mitochondrial DNA. Aquaculture, 319 (3-4). pp. 328-336.
Fox, Rebecca J., and Bellwood, David R. (2011) Unconstrained by the clock? Plasticity of diel activity rhythm in a tropical reef fish, Siganus lineatus. Functional Ecology, 25 (5). pp. 1096-1105.
Lamb, Joleah B., and Willis, Bette L. (2011) Using coral disease prevalence to assess the effects of concentrating tourism activities on offshore reefs in a tropical marine park. Conservation Biology, 25 (5). pp. 1044-1052.
Palmer, C.V., Bythell, J.C., and Willis, B.L. (2011) A comparative study of phenoloxidase activity in diseased and bleached colonies of the coral Acropora millepora. Developmental and Comparative Immunology, 35 (10). pp. 1098-1101.
Brooker, R.M., Munday, P.L., and Jones, G.P. (2011) Coral obligate filefish masquerades as branching coral. Coral Reefs, 30 (3). p. 803.
Young, M.A.L., and Bellwood, D.R. (2011) Diel patterns in sea urchin activity and predation on sea urchins on the Great Barrier Reef. Coral Reefs, 30 (3). pp. 729-736.
Pankhurst, Ned, and Munday, Philip (2011) Effects of climate change on fish reproduction and early life history stages. Marine and Freshwater Research, 62 (9). pp. 1015-1026.
Sato, Y., Bourne, D.G., and Willis, B.L. (2011) Effects of temperature and light on the progression of black band disease on the reef coral, Montipora hispida. Coral Reefs, 30 (3). pp. 753-761.
Konow, Nicolai, and Bellwood, David R. (2011) Evolution of high trophic diversity based on limited functional disparity in the feeding apparatus of marine angelfishes (f. Pomacanthidae). PLoS ONE, 6 (9). e24113. pp. 1-11.
Mitchell, Matthew D., McCormick, Mark I., Ferrari, Maud C.O., and Chivers, Douglas P. (2011) Friend or foe? The role of latent inhibition in predator and non-predator labelling by coral reef fishes. Animal Cognition, 14 (5). pp. 707-714.
Tziouveli, Vasiliki, Bastos-Gomez, Giana, and Bellwood, Orpha (2011) Functional morphology of mouthparts and digestive system during larval development of the cleaner shrimp Lysmata amboinensis (de Man, 1888). Journal of Morphology, 272 (9). pp. 1080-1091.
Broderick, D., Ovenden, J.R., Buckworth, R.C., Newman, S.J., Lester, R.J.G., and Welch, D.J. (2011) Genetic population structure of grey mackerel Scomberomorus semifasciatus in northern Australia. Journal of Fish Biology, 79 (3). pp. 633-661.
Lönnstedt, O.M., and McCormick, M.I. (2011) Growth history and intrinsic factors influence risk assessment at a critical life transition for a fish. Coral Reefs, 30 (3). pp. 805-812.
Johansen, J.L., and Jones, G.P. (2011) Increasing ocean temperature reduces the metabolic performance and swimming ability of coral reef damselfishes. Global Change Biology, 17 (9). pp. 2971-2979.
Bay, Line Kolind, Cumbo, Vivian Ruth, Abrego, David, Kool, Johnathan Travis, Ainsworth, Tracy Danielle, and Willis, Bette Lynn (2011) Infection dynamics vary between Symbiodinium types and cell surface treatments during establishment of endosymbiosis with coral larvae. Diversity, 3 (3). pp. 356-374.
Ferrari, Maud C.O., Dixson, Danielle L., Munday, Philip L., McCormick, Mark I., Meekan, Mark G., Sih, Andrew, and Chivers, Douglas P. (2011) Intrageneric variation in antipredator responses of coral reef fishes affected by ocean acidification: implications for climate change projections on marine communities. Global Change Biology, 17 (9). pp. 2980-2986.
Carl, C., Poole, A.J., Vucko, M.J., Williams, M.R., Whalan, S., and de Nys, R. (2011) Optimising settlement assays of pediveligers and plantigrades of Mytilus galloprovincialis. Biofouling, 27 (8). pp. 859-868.
Hisano, Mizue, Connolly, Sean R., and Robbins, William D. (2011) Population growth rates of reef sharks with and without fishing on the Great Barrier Reef: robust estimation with multiple models. PLoS ONE, 6 (9). e25028. pp. 1-10.
Gribben, Paul E., Jeffs, Andrew G., de Nys, Rocky, and Steinberg, Peter D. (2011) Relative importance of natural cues and substrate morphology for settlement of the New Zealand Greenshell™ mussel, Perna canaliculus. Aquaculture, 319 (1-2). pp. 240-246.
Eriksen, M.S., Færevik, G., Kittilsen, S., McCormick, M.I., Damsgård, B., Braithwaite, V.A., Braastad, B.O., and Bakken, M. (2011) Stressed mothers - troubled offspring: a study of behavioural maternal effects in farmed Salmo salar. Journal of Fish Biology, 79 (3). pp. 575-586.
Morgan, Jess A.T., Welch, David J., Harry, Alistair V., Street, Raewyn, Broderick, Damien, and Ovenden, Jennifer R. (2011) A mitochondrial species identification assay for Australian blacktip sharks (Carcharhinus tilstoni, C. limbatus and C. amblyrhynchoides) using real-time PCR and high-resolution melt analysis. Molecular Ecology, 11 (5). pp. 813-819.
Cetina-Heredia, Paulina, and Connolly, Sean R. (2011) A simple approximation for larval retention around reefs. Coral Reefs, 30 (3). pp. 593-605.
Price, Ian R. (2011) A taxonomic revision of the marine green algal genera Caulerpa and Caulerpella (Chlorophyta, Caulerpaceae) in northern (tropical and subtropical) Australia. Australian Systematic Botany, 24 (3). pp. 137-213.
Palmer, Caroline V., Traylor-Knowles, Nikki G., Willis, Bette L., and Bythell, John C. (2011) Corals use similar immune cells and wound-healing processes as those of higher organisms. PLoS ONE, 6 (8). e23992. pp. 1-11.
Hardy, Christopher M., Adams, Mark, Jerry, Dean R., Court, Leon N., Morgan, Matthew J., and Hartley, Diana M. (2011) DNA barcoding to support conservation: species identification, genetic structure and biogeography of fishes in the Murray-Darling River Basin, Australia. Marine and Freshwater Research, 62 (8). pp. 887-901.
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Wang, Chenwei, Deakin, Janine E., Rens, Willem, Zenger, Kyall R., Belov, Katherine, Marshall Graves, Jennifer A., and Nicholas, Frank W. (2011) A first-generation integrated tammar wallaby map and its use in creating a tammar wallaby first-generation virtual genome map. BMC Genomics, 12. 422. pp. 1-12.
Wang, Chenwei, Webley, Lee, Wei, Ke-jun, Wakefield, Matthew J., Patel, Hardip R., Deakin, Janine E., Alsop, Amber, Marshall Graves, Jennifer A., Cooper, Desmond W., Nicholas, Frank W., and Zenger, Kyall R. (2011) A second-generation anchored genetic linkage map of the tammar wallaby (Macropus eugenii). BMC Genetics, 12. 72. pp. 1-16.
De Santis, Christian, Wade, Nicholas M., Jerry, Dean R., Preston, Nigel P., Glencross, Brett D., and Sellars, Melony J. (2011) Growing backwards: an inverted role for the shrimp ortholog of vertebrate myostatin and GDF11. Journal of Experimental Biology, 214 (16). pp. 2671-2677.
Lönnstedt, Oona M., and McCormick, Mark I. (2011) Chemical alarm cues inform prey of predation threat: the importance of ontogeny and concentration in a coral reef fish. Animal Behaviour, 82 (2). pp. 213-218.
Moorhead, Jonathan A., and Zeng, Chaoshu (2011) Breeding of the forktail blenny Meiacanthus atrodorsalis: broodstock management and larval rearing. Aquaculture, 318 (1-2). pp. 248-252.
Romano, Nicholas, and Zeng, Chaoshu (2011) Importance of balanced Na+/K+ ratios for blue swimmer crabs, Portunus pelagicus, to cope with elevated ammonia-N and differences between in vitro and in vivo gill Na+/K+-ATPase responses. Aquaculture, 318 (1-2). pp. 154-161.
Ovenden, Jennifer R., Morgan, Jess A.T., Street, Raewyn, Tobin, Andrew, Simpfendorfer, Colin, Macbeth, William, and Welch, David (2011) Negligible evidence for regional genetic population structure for two shark species Rhizoprionodon acutus (Rüppell, 1837) and Sphyrna lewini (Griffith & Smith, 1834) with contrasting biology. Marine Biology, 158 (7). pp. 1497-1509.
Cripps, Ingrid, Munday, Philip L., and McCormick, Mark I. (2011) Ocean acidification affects prey detection by a predatory reef fish. PLoS One, 6 (7). e22736. pp. 1-7.
Todd, Erica, Blair, David, Hamann, Mark, and Jerry, Dean (2011) Twenty-nine microsatellite markers for two Australian freshwater turtles, Elseya albagula and Emydura macquarii krefftii: development from 454-sequence data and utility in related taxa. Conservation Genetics Resources, 3 (3). pp. 449-456.
Beukers-Stewart, B.D., Beukers-Stewart, J.S, and Jones, G.P. (2011) Behavioural and developmental responses of predatory coral reef fish to variation in the abundance of prey. Coral Reefs, 30 (3). pp. 855-864.
Leis, Jeffrey M., Van Herwerden, Lynne, and Patterson, Heather (2011) Estimating connectivity in marine fish populations: what works best? In: Gibson, R.N., Atkinson, R.J.A., and Gordon, J.D.M., (eds.) Oceanography and Marine Biology: An Annual Review. Oceanography and Marine Biology: An Annual Review, 49 . CRC Press, Boca Raton, FL, USA, pp. 193-234.
Stella, Jessica S., Pratchett, Morgan S., Hutchings, Pat A., and Jones, Geoffrey P. (2011) Coral-associated invertebrates: diversity, ecology importance and vulnerability to disturbance. Oceanography and Marine Biology: an annual review, 49. pp. 43-104.
McGinty, Erin L., Zenger, Kyall R., Taylor, Joseph U.U., Evans, Brad S., and Jerry, Dean R. (2011) Diagnostic genetic markers unravel the interplay between host and donor oyster contribution in cultured pearl formation. Aquaculture, 316 (1-4). pp. 20-24.
Bellwood, D.R., and Choat, J.H. (2011) Dangerous demographics: the lack of juvenile humphead parrotfishes Bolbometopon muricatum on the Great Barrier Reef. Coral Reefs, 30 (2). pp. 549-554.
Harry, Alastair V., Tobin, Andrew J., Simpfendorfer, Colin A., Welch, David J., Mapleston, Amos, White, Jimmy, Williams, Ashley J., and Stapley, Jason (2011) Evaluating catch and mitigating risk in a multispecies, tropical, inshore shark fishery within the Great Barrier Reef World Heritage Area. Marine and Freshwater Research, 62 (6). pp. 710-721.
Grutter, Alexandra S., Crean, Angela J., Curtis, Lynda M., Kuris, Armand M., Warner, Robert R., and McCormick, Mark I. (2011) Indirect effects of an ectoparasite reduce successful establishment of a damselfish at settlement. Functional Ecology, 25 (3). pp. 586-594.
Abdul Wahab, M.A., De Nys, R., and Whalan, S. (2011) Larval behaviour and settlement cues of a brooding coral reef sponge. Coral Reefs, 30 (2). pp. 451-460.
Horne, John B., Momigliano, Paolo, Welch, David J., Newman, Stephen J., and van Herwerden, Lynne (2011) Limited ecological population connectivity suggests low demands on self-recruitment in a tropical inshore marine fish (Eleutheronema tetradactylum: Polynemidae). Molecular Ecology, 20 (11). pp. 2291-2306.
Ceccarelli, Daniela, Beger, Maria, Kospartov, Marie, Richards, Zoe, and Birrell, Chico (2011) Population trends of remote invertebrate resources in a marine reserve: trochus and holothurians at Ashmore Reef. Pacific Conservation Biology, 17 (2). pp. 132-140.
Karlson, Ronald H., Connolly, Sean R., and Hughes, Terence P. (2011) Spatial variance in abundance and occupancy of corals across broad geographic scales. Ecology, 92 (6). pp. 1282-1291.
Bonaldo, R.M., and Bellwood, D.R. (2011) Spatial variation in the effects of grazing on epilithic algal turfs on the Great Barrier Reef, Australia. Coral Reefs, 30 (2). pp. 381-390.
Fraser, M.R., and de Nys, R. (2011) A quantitative determination of deformities in barramundi (Lates calcarifer; Bloch) fed a vitamin deficient diet. Aquaculture Nutrition, 17 (3). pp. 235-243.
Beattie, Andrew J., Hay, Mark, Magnusson, Bill, de Nys, Rocky, Smeathers, James, and Vincent, Julian F.V. (2011) Ecology and bioprospecting. Austral Ecology, 36 (3). pp. 341-356.
Barnett, Adam, Abrantes, Kátya G., Stevens, John D., and Semmens, Jayson M. (2011) Site fidelity and sex-specific migration in a mobile apex predator: implications for conservation and ecosystem dynamics. Animal Behaviour, 81 (5). pp. 1039-1048.
Miller, David A., Choat, John Howard, Clements, Kendall D., and Angert, Esther R. (2011) The spoIIE homolog of Epulopiscium sp. type B is expressed early in intracellular offspring development. Journal of Bacteriology, 193 (10). pp. 2642-2646.
Donelson, Jennifer M., Munday, Philip, Mccormick, Mark I., and Nilsson, Göran E. (2011) Acclimation to predicted ocean warming through developmental plasticity in a tropical reef fish. Global Change Biology, 17 (4). pp. 1712-1719.
Webster, Nicole S., Cobb, Rose E., Soo, Rochelle, Anthony, Shelley L., Battershill, Christopher N., Whalan, Stephen, and Evans-Illidge, Elizabeth (2011) Bacterial community dynamics in the marine sponge Rhopaloeides odorabile under in situ and ex situ cultivation. Marine Biotechnology, 13 (2). pp. 296-304.
Le Vay, Lewis, Shelley, Colin, Zeng, Chaoshu, and Sorgeloos, Patrick (2011) International symposium on aquaculture, biology and management of commercially important crabs, Shanghai (China), 8–11 November 2009 (ISABMC-2009). Aquaculture International, 19 (2). pp. 215-216.
De Santis, Christian, Smith-Keune, Carolyn, and Jerry, Dean R. (2011) Normalizing RT-qPCR data: are we getting the right answers? An appraisal of normalization approaches and internal reference genes from a case study in the Finfish Lates calcarifer. Marine Biotechnology, 13 (2). pp. 170-180.
Dickens, Luke C., Goatley, Christopher H.R., Tanner, Jennifer K., and Bellwood, David R. (2011) Quantifying relative diver effects in underwater visual censuses. PLoS One, 6 (4). e18965. pp. 1-8.
De Santis, C., and Jerry, D.R. (2011) Differential tissue-regulation of myostatin genes in the teleost fish Lates calcarifer in response to fasting. Evidence for functional differentiation. Molecular and Cellular Endocrinology, 335 (2). 158-165 .
Bennett, S., and Bellwood, D.R. (2011) Latitudinal variation in macroalgal consumption by fishes on the Great Barrier Reef. Marine Ecology Progress Series, 426. pp. 241-252.
Ceccarelli, D.M., Jones, G.P, and McCook, L.J. (2011) Interactions between herbivorous fish guilds and their influence on algal succession on a coastal coral reef. Journal of Experimental Marine Biology and Ecology, 399 (1). pp. 60-67.
Kingsford, Michael, Smith, Felicity, and Flood, M.J. (2011) Growth and pelagic larval duration of presettlement and newly settled neon damselfish, Pomacentrus coelestis, at multiple spatial scales. Coral Reefs, 30 (1). pp. 203-214.
Bonaldo, R.M., and Bellwood, D.R. (2011) Parrotfish predation on massive Porites on the Great Barrier Reef. Coral Reefs, 30 (1). pp. 259-269.
Trip, E.D.L., Clements, K.D., Raubenheimer, D., and Choat, J.H. (2011) Reproductive biology of an odacine labrid, Odax pullus. Journal of Fish Biology, 78 (3). pp. 741-761.
Holmes, Thomas H., and McCormick, Mark I. (2011) Response across a gradient: behavioural reactions of newly settled fish to predation cues. Animal Behaviour, 81 (3). pp. 543-550.
Moore, B.R., Stapley, J., Allsop, Q., Newman, S.J., Ballagh, A., Welch, D.J., and Lester, R.J.G. (2011) Stock structure of blue threadfin Eleutheronema tetradactylum across northern Australia, as indicated by parasites. Journal of Fish Biology, 78 (3). pp. 923-936.
Hoey, Andrew S., and Bellwood, David R. (2011) Suppression of herbivory by macroalgal density: a critical feedback on coral reefs? Ecology Letters, 14 (3). pp. 267-273.
Aeby, Greta S., Williams, Gareth J., Franklin, Erik C., Haapkyla, Jessica, Harvell, C. Drew, Neale, Stephen, Page, Cathie A., Raymundo, Laurie, Vargas-Ángel, Bernardo, Willis, Bette L., Work, Thierry M., and Davy, Simon K. (2011) Growth anomalies on the coral genera Acropora and Porites are strongly associated with host density and human population size across the Indo-Pacific. PLoS ONE, 6 (2). e16887. pp. 1-9.
Bannister, Raymond, Hoogenboom, Mia, Anthony, Kenneth R. N., Battershill, Chris, Whalan, Stephen, Webster, Nicole, and De Nys, Rocky (2011) Incongruence between the distribution of a common coral reef sponge and photosynthesis. Marine Ecology Progress Series, 423. pp. 95-100.
Munday, Philip L., Gagliano, Monica, Donelson, Jennifer M., Dixson, Danielle L., and Thorrold, Simon (2011) Ocean acidification does not affect the early life history development of a tropical marine fish. Marine Ecology Progress Series, 423. pp. 211-221.
Haapkylä, Jessica, Unsworth, Richard K.F., Flavell, Mike, Bourne, David G., Schaffelke, Britta, and Willis, Bette L. (2011) Seasonal rainfall and runoff promote coral disease on an inshore reef. PLoS ONE, 6 (2). e16893. pp. 1-10.
Shaddick, Kim, Gilligan, Dean M., Burridge, Christopher P., Jerry, Dean R., Truong, Kiet, and Beheregaray, Luciano B. (2011) Historic divergence with contemporary connectivity in a catadromous fish, the estuary perch (Macquaria colonorum). Canadian Journal of Fisheries and Aquatic Sciences, 68 (2). pp. 304-318.
Wu, Xugan, Wang, Zongkai, Cheng, Yong Xu, Zeng, Chaoshu, Yang, Xiaozhen, and Lu, Jianfeng (2011) Effects of dietary phospholipids and highly unsaturated fatty acids on the precocity, survival, growth and hepatic lipid composition of juvenile Chinese mitten crab, Eriocheir sinensis (H. Milne-Edwards). Aquaculture Research, 42 (3). pp. 457-468.
Hasbi, Ghitarina, de Nys, Rocky, Burns, Kathryn, Whalan, Stephen, and Dunlap, Walter C. (2011) Hepatic coenzyme Q redox balance of fishes as a potential bioindicator of environmental contamination by polycyclic aromatic hydrocarbons. Biology Letters, 7 (1). pp. 123-126.
Liu, Zhijun, Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, and Yang, Xiaozhen (2011) Ovarian re-maturation following the first spawning in the Chinese mitten crab, Eriocheir sinensis (H. Milne-Edwards). Aquaculture Research, 42 (3). pp. 417-426.
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Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Wang, Chunlin, and Cui, Zhaoxia (2010) Reproductive performance and offspring quality of the first and the second brood of female swimming crab, Portunus Trituberculatus. Aquaculture, 303 (1-4). pp. 94-100.
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Andrés, Mireia, Rotllant, Guiomar, and Zeng, Chaoshu (2010) Survival, development and growth of larvae of the blue swimmer crab, Portunus pelagicus, cultured under different photoperiod conditions. Aquaculture, 300 (1-4). pp. 218-222.
Hobbs, Jean-Paul, and Frisch, Ashley J. (2010) Coral disease in the Indian Ocean: taxonomic susceptibility, spatial distribution and the role of host density on the prevalence of white syndrome. Diseases of Aquatic Organisms, 89 (1). pp. 1-8.
Sumpton, W.D., Brown, I.W., Mayer, D.G., McLennan, M.F., Mapleston, A., Butcher, A.R., Welch, D.J., Kirkwood, J.M., Sawynok, B., and Begg, G.A. (2010) Assessing the effects of line capture and barotrauma relief procedures on post-release survival of key tropical reef fish species in Australia using recreational tagging clubs. Fisheries Management and Ecology, 17 (1). pp. 77-88.
Wong, Marian (2010) Ecological constraints and benefits of philopatry promote group-living in a social but non-cooperatively breeding fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 277 (1680). pp. 353-358.
Wu, X., Chang, G., Cheng, Y., Zeng, C., Southgate, P.C., and Lu, J. (2010) Effects of dietary phospholipid and highly unsaturated fatty acid on the gonadal development, tissue proximate composition, lipid class and fatty acid composition of precocious Chinese mitten crab, Eriocheir sinensis. Aquaculture Nutrition, 16 (1). pp. 25-36.
Bellwood, D.R., Klanten, S., Cowman, P.F., Pratchett, M.S., Konow, N., and Van Herwerden, L. (2010) Evolutionary history of the butterflyfishes (f: Chaetodontidae) and the rise of coral feeding fishes. Journal of Evolutionary Biology, 23 (2). pp. 335-349.
Pollock, F. Joseph, Wilson, Bryan, Johnson, Wesley R., Morris, Pamela J., Willis, Bette L., and Bourne, David G. (2010) Phylogeny of the coral pathogen Vibrio coralliilyticus. Environmental Microbiology Reports, 2 (1). pp. 172-178.
Evans, R.D., Van Herwerden, L., Russ, G.R., and Frisch, A.J. (2010) Strong genetic but not spatial subdivision of two reef fish species targeted by fishers on the Great Barrier Reef. Fisheries Research, 102 (1-2). pp. 16-25.
Sato, Yui, Willis, Bette L., and Bourne, David G. (2010) Successional changes in bacterial communities during the development of black band disease on the reef coral, Montipora hispida. ISME Journal, 4 (2). pp. 203-214.
Masonjones, Heather D., Rose, Emily, McRae, Lori Benson, and Dixson, Danielle (2010) An examination of the population dynamics of syngnathid fishes within Tampa Bay, Florida, USA. Current Zoology, 56 (1). pp. 118-133.
Holmes, Thomas H., and McCormick, Mark I. (2010) Size-selectivity of predatory reef fish on juvenile prey. Marine Ecology Progress Series, 399. pp. 273-283.
Hoey, Andrew, and Bellwood, David (2010) Among-habitat variation in herbivory on Sargassum spp. on a mid-shelf reef in the northern Great Barrier Reef. Marine Biology, 157 (1). pp. 189-200.
Dixson, Danielle L., Munday, Philip L., and Jones, Geoffrey P. (2010) Ocean acidification disrupts the innate ability of fish to detect predator olfactory cues. Ecology Letters, 13 (1). pp. 68-75.
Tobin, A., Schlaff, A., Tobin, R., Penny, A., Ayling, Anthony, Krause, B., Welch, D., Sutton, S., Sawynok, B., Marshall, N., Marshall, P., and Maynard, J. (2010) Adapting to Change: Minimising Uncertainty about the Effects of Rapidly-Changing Environmental Conditions on the Queensland Coral Reef Fin Fish Fishery. Report. Fishing and Fisheries Research Centre, James Cook University, Townsville, Qld, Australia.
Tobin, R.C., Sutton, S.G., Penny, A., Williams, L., Maroske, J., and Nilsson, J. (2010) Baseline Socio-Economic Data for Queensland East Coast Inshore and Rocky Reef Fishery Stakeholders. Part A: Commercial Fishers. Report. Fishing and Fisheries Research Centre, Townsville, QLD. Australia.
Tobin, R.C., Beggs, K., Sutton, S.G., Penny, A., Maroske, J., and Williams, L. (2010) Baseline Socio-Economic Data for Queensland East Coast Inshore and Rocky Reef Fishery Stakeholders. Part B: Charter Fishers. Report. Fishing and Fisheries Research Centre, Townsville, QLD, Australia.
Tobin, R.C., Beggs, K., Sutton, S.G., and Penny, A. (2010) Baseline Socio-Economic Data for Queensland East Coast Inshore and Rocky Reef Fishery Stakeholders. Part C: Recreational Fishers. Report. Fishing and Fisheries Research Centre, Townsville, QLD, Australia.
Tobin, R.C., Beggs, K., Sutton, S.G., and Penny, A. (2010) Baseline Socio-Economic Data for Queensland East Coast Inshore and Rocky Reef Fishery Stakeholders. Part D: Seafood Consumers. Report. Fishing and Fisheries Research Centre, Townsville, QLD, Australia.
Meekan, Mark G., von Kuerthy, Corinna, Mccormick, Mark I., and Radford, Ben (2010) Behavioural mediation of the costs and benefits of fast growth in a marine fish. Animal Behaviour, 79 (4). pp. 803-809.
Cvitanovic, C., and Hoey, A.S. (2010) Benthic community composition influences within-habitat variation in macroalgal browsing on the Great Barrier Reef. Marine and Freshwater Research, 61 (9). pp. 999-1005.
Munday, P.L., Kuwamura, T., and Kroon, F.J. (2010) Bi-directional sex change in marine fishes. In: Cole, Kathleen S., (ed.) Reproduction and sexuality in marine fishes: patterns and processes. University of California Press, Berkeley, pp. 241-271.
Wilson, S.K., Adjeroud, M., Bellwood, D.R., Berumen, M.L., Booth, D., Bozec, Y.-Marie, Chabanet, P., Cheal, A., Cinner, J., Depczynski, M., Feary, D.A., Gagliano, M., Graham, Nicholas, Halford, A.H., Halpern, B.S., Harborne, A.R., Hoey, A.S., Holbrook, S.J., Jones, G.P., Kulbiki, M., Letourneur, Y., De Loma, T.L., McClanahan, T, McCormick, M.I., Meekan, M.G., Mumby, P. J., Munday, P.L., Öhman, M.C., Pratchett, M.S., Riegl, B., Sano, M., Schmitt, R.J., and Syms, C. (2010) Crucial knowledge gaps in current understanding of climate change impacts on coral reef fishes. Journal of Experimental Biology, 213. pp. 894-900.
Lee, Tristan, Zenger, Kyall R., Close, Robert L., Jones, Marilyn, and Phalen, David N. (2010) Defining spatial genetic structure and management units for vulnerable koala (Phascolarctos cinereus) populations in the Sydney region, Australia. Wildlife Research, 37 (2). pp. 156-165.
Heupel, Michelle R., Williams, Ashley J., Welch, David J., Davies, Campbell R., Penny, Ann, Kritzer, Jacob P., Marriott, Ross J., and Mapstone, Bruce D. (2010) Demographic characteristics of exploited tropical lutjanids: a comparative analysis. Fishery Bulletin, 108 (4). pp. 420-432.
Heupel, Michelle R., Williams, Ashley, Welch, David J., Davies, Campbell R., Adams, Samantha, Carlos, Gary, and Mapstone, Bruce D. (2010) Demography of a large exploited grouper, Plectropomus laevis: implications for fisheries management. Marine and Freshwater Research, 61 (2). pp. 184-195.
Bondarenko, Olga, Kininmonth, Stuart, and Kingsford, Michael (2010) Deployment of wireless sensor network to study oceanography of coral reefs. International Journal on Advances in Networks and Services, 3 (1 and 2). pp. 92-102.
Moorhead, Jonathan A., and Zeng, Chaoshu (2010) Development of captive breeding techniques for marine ornamental fish: a review. Reviews in Fisheries Science, 18 (4). pp. 315-343.
Donelson, J.M., Munday, P.L., McCormick, M.I., Pankhurst, N.W., and Pankhurst, P.M. (2010) Effects of elevated water temperature and food availability on the reproductive performance of a coral reef fish. Marine Ecology Progress Series, 401. pp. 233-243.
Grutter, A.S., Cribb, T.H., McCallum, H., Pickering, J.L., and Mccormick, M.I. (2010) Effects of parasites on larval and juvenile stages of the coral reef fish Pomacentrus moluccensis. Coral Reefs, 29 (1). pp. 31-40.
Nelson, Paul N., Webb, Michael J., Orrell, Ian, van Rees, Harm, Banabas, Murom, Berthelsen, Suzanne, Sheaves, Marcus, Bakani, Felix, Pukam, Otto, Hoare, Michael, Griffiths, William, King, Graham, Carberry, Peter, Pipai, Rachel, McNeill, Ann, Meekers, Petra, Lord, Simon, Butler, James, Pattison, Tony, Armour, John, and Dewhurst, Charles (2010) Environmental sustainability of oil palm cultivation in Papua New Guinea. ACIAR Technical Reports, 75 . Australian Centre for International Agricultural Research, Canberra, ACT, Australia.
Connolly, Sean R., and Baird, Andrew H. (2010) Estimating dispersal potential for marine larvae: dynamic models applied to scleractinian corals. Ecology, 91 (12). pp. 3572-3583.
Goatley, Christopher H.R., Bellwood, David R., and Bellwood, Orpha (2010) Fishes on coral reefs: changing roles over the past 240 million years. Paleobiology, 36 (3). pp. 415-427.
Farnsworth, Claire A, Bellwood, David, and Van Herwerden, Lynne (2010) Genetic structure across the GBR: evidence from short-lived gobies. Marine Biology, 157 (5). pp. 945-953.
Catalano, Sarah R., and Hutson, Kate S. (2010) Harmful parasitic crustaceans infecting wild arripids: A potential threat to southern Australian finfish aquaculture. Aquaculture, 303 (1-4). pp. 101-104.
West, Roianne, Usher, Kim, and Foster, Kim (2010) Increased numbers of Australian Indigenous nurses would make a significant contribution to 'closing the gap' in Indigenous health: what is getting in the way? Contemporary Nurse, 36 (1-2). pp. 121-130.
McCormick, M.I., Moore, J.A.Y., and Munday, P.L. (2010) Influence of habitat degradation on fish replenishment. Coral Reefs, 29 (3). pp. 537-546.
Walther, Benjamin D., Kingsford, Michael J., O'Callaghan, Mark D., and McCulloch, Malcolm T. (2010) Interactive effects of ontogeny, food ration and temperature on elemental incorporation in otoliths of a coral reef fish. Environmental Biology of Fishes, 89 (3-4). pp. 441-451.
Owens, L., Liessmann, L., La Fauce, K., Nyguyen, T., and Zeng, C. (2010) Intranuclear bacilliform virus and hepatopancreatic parvovirus (PmergDNV) in the mud crab Scylla serrata (Forskal) of Australia. Aquaculture, 310 (1-2). pp. 47-51.
Souter, P., Willis, B.L., Bay, L.K., Caley, M.J., Muirhead, A., and van Oppen, M.J.H. (2010) Location and disturbance affect population genetic structure in four coral species of the genus Acropora on the Great Barrier Reef. Marine Ecology Progress Series, 416. pp. 35-45.
Fuiman, Lee A., Meekan, Mark G., and McCormick, Mark I. (2010) Maladaptive behavior reinforces a recruitment bottleneck in newly settled fishes. Oecologia, 164 (1). pp. 99-108.
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Neaves, L.E., Zenger, K.R., Cooper, D.W., and Eldridge, M.D.B. (2010) Molecular detection of hybridization between sympatric kangaroo species in south-eastern Australia. Heredity, 104. pp. 502-512.
de Nys, Rocky, Guenther, Jana, and Uriz, Maria (2010) Natural control of fouling in biofouling. In: Dürr, Simone, and Thomason, Jeremy C., (eds.) Biofouling. Wiley-Blackwell, UK, pp. 109-120.
Kingsford, Michael J., and Carlson, Ian J. (2010) Patterns of distribution and movement of fishes, Ophthalmolepis lineolatus and Hypoplectrodes maccullochi, on temperate rocky reefs of south eastern Australia. Environmental Biology of Fishes, 88 (2). pp. 105-118.
Seneca, Francois O., Forêt , Sylvain, Ball, Eldon E., Smith-Keune, Carolyn, Miller, David J., and van Oppen, Madeleine J.H. (2010) Patterns of gene expression in a scleractinian coral undergoing natural bleaching. Marine Biotechnology, 12 (5). pp. 594-604.
Edmunds, Richard C., Van Herwerden, Lynne, and Fulton, Christopher J. (2010) Population-specific locomotor phenotypes are displayed by barramundi, Lates calcarifer, in response to thermal stress. Canadian Journal of Fisheries and Aquatic Sciences, 67 (7). pp. 1068-1074.
Bell, Johann, Batty, Mike, Ganachaud, Alex, Gehrke, Peter, Hobday, Alistair, Hoegh-Guldberg, Ove, Johnson, Johanna, Le Borgne, Robert, Lehodey, Patrick, Lough, Janice, Pickering, Tim, Pratchett, Morgan, Sheaves, Marcus, and Waycott, Michelle (2010) Preliminary assessment of the effects of climate change on fisheries and aquaculture in the Pacific. In: Gillett, Robert, (ed.) Fisheries in the Economies of the Pacific Island Countries and Territories. Pacific Studies Series . Asian Development Bank, Manila, Philippines, pp. 451-469.
Sale, P.F., Van Lavieren, H., Ablan Lagman, M.C., Atema, J., Butler, M., Fauvelot, C., Hogan, J.D., Jones, G.P., Lindeman, K.C., Paris, C.B., Steneck, R., and Stewart, H.L. (2010) Preserving Reef Connectivity: a Handbook for Marine Protected Area Managers. Report. Coral Reef Targeted Research &Capacity Building for Management Project (CRTR).
Luter, Heidi M., Whalan, Stephen, and Webster, Nicole S. (2010) Prevalence of tissue necrosis and brown spot lesions in a common marine sponge. Marine and Freshwater Research, 61 (4). pp. 484-489.
Pirozzi, Igor, Booth, Mark A., and Allan, Geoff L. (2010) Protein and energy utilization and the requirements for maintenance in juvenile mulloway (Argyrosomus japonicus). Fish Physiology and Biochemistry, 36 (1). pp. 109-121.
Catalano, Sarah R., Hutson, Kate S., Ratcliff, Rodney M., and Whittington, Ian D. (2010) Redescriptions of two species of microcotylid monogeneans from three arripid hosts in southern Australian waters. Systematic Parasitology, 76 (3). pp. 211-222.
Munday, Philip L., Dixson, Danielle L., McCormick, Mark I., Meekan, Mark, Ferrari, Maud C.O., and Chivers, Douglas P. (2010) Replenishment of fish populations is threatened by ocean acidification. Proceedings of the National Academy of Sciences of the United States of America, 107 (29). pp. 12930-12934.
Hoey, A.S. (2010) Size matters: macroalgal height influences the feeding response of coral reef herbivores. Marine Ecology Progress Series, 411. pp. 299-302.
Holmes, Thomas H., and McCormick, Mark I. (2010) Smell, learn and live: the role of chemical alarm cues in predator learning during early life history in a marine fish. Behavioural Processes, 83 (3). pp. 299-305.
Welch, David J., Mapstone, Bruce D., Davies, Campbell C., and Russ, Garry R. (2010) Spatial and fishing effects on sampling gear biases in a tropical reef line fishery. Marine and Freshwater Research, 61 (10). pp. 1134-1146.
Haapkylä, J., Melbourne-Thomas, J., Flavell, M., and Willis, B.L. (2010) Spatiotemporal patterns of coral disease prevalence on Heron Island, Great Barrier Reef, Australia. Coral Reefs, 29 (4). pp. 1035-1045.
Newman, Stephen J., Wright, Ian W., Rome, Ben M., Mackie, Michael C., Lewis, Paul D., Buckworth, Rik C., Ballagh, Aaron C., Garrett, Rod N., Stapley, Jason, Broderick, Damien, Ovenden, Jennifer R., and Welch, David J. (2010) Stock structure of Grey Mackerel, Scomberomorus semifasciatus (Pisces: Scombridae) across northern Australia, based on otolith stable isotope chemistry. Environmental Biology of Fishes, 89 (3-4). pp. 357-367.
Newton, James R., Smith-Keune, Carolyn, and Jerry, Dean R. (2010) Thermal tolerance varies in tropical and sub-tropical populations of barramundi (Lates calcarifer) consistent with local adaptation. Aquaculture, 308 (Supplement 1). S128-S132.
O'Shea, Owen R,, Kingsford, Michael J., and Seymour, Jamie (2010) Tide-related periodicity of manta rays and sharks to cleaning stations on a coral reef. Marine and Freshwater Research, 61 (1). pp. 65-73.
Templeman, Michelle A., and Kingsford, Michael J. (2010) Trace element accumulation in Cassiopea sp. (Scyphozoa) from urban marine environments in Australia. Marine Environmental Research, 69 (2). pp. 63-72.
Stella, J.S., Jones, G.P., and Pratchett, M.S. (2010) Variation in the structure of epifaunal invertebrate assemblages among coral hosts. Coral Reefs, 29 (4). pp. 957-973.
Pirozzi, I., Booth, M.A., and Allan, G.L. (2010) The interactive effects of dietary protein and energy on feed intake, growth and protein utilization of juvenile mulloway (Argyrosomus japonicus). Aquaculture Nutrition, 16 (1). pp. 61-71.
Charters, Robbie A., Lester, Robert J.G., Buckworth, Rik C., Newman, Stephen J., Ovenden, Jennifer R., Broderick, Damien, Kravchuck, Olena, Ballagh, Aaron, and Welch, David J. (2010) The stock structure of grey mackerel Scomberomorus semifasciatus in Australia as inferred from its parasite fauna. Fisheries Research, 101 (1-2). pp. 94-99.
Baker, Ron, and Sheaves, Marcus (2009) Overlooked small and juvenile piscivores dominate shallow-water estuarine "refuges" in tropical Australia. Estuarine, Coastal and Shelf Science , 85 (4). pp. 618-626.
Duckworth, Alan R., Wolff, Carsten W., and Luter, Heidi (2009) Patterns of abundance and size across varying spatial scales for the coral reef sponge Coscinoderma matthewsi. Marine Ecology Progress Series, 396. pp. 27-33.
Camus, Thomas, Zeng, Chaoshu, and McKinnon, A. David (2009) Egg production, egg hatching success and population increase of the tropical paracalanid copepod, Bestiolina similis (Calanoida: Paracalanidae) fed different microalgal diets. Aquaculture, 297 (1). pp. 169-175.
Elmhirst, Toby, Connolly, Sean R., and Hughes, Terry P. (2009) Connectivity, regime shifts and the resilience of coral reefs. Coral Reefs, 28 (4). pp. 949-957.
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Baird, Andrew H., Guest, James R., and Willis, Bette L. (2009) Systematic and biogeographical patterns in the reproductive biology of scleractinian corals. Annual Review of Ecology, Evolution, and Systematics, 40. pp. 551-571.
Ritchie, S.A., Rapley, L.P. , Williams, C., Johnson, P.H., Larkman, M., Silcock, R.M., Long, S.A., and Russell, R.C. (2009) A lethal ovitrap-based mass trapping scheme for dengue control in Australia: I. Public acceptability and performance of lethal ovitraps. Medical and Veterinary Entomology, 23 (4). pp. 295-302.
Bonin, Mary C., Munday, Philip L., McCormick, Mark I., Srinivasan, Maya, and Jones, Geoffrey P. (2009) Coral-dwelling fishes resistant to bleaching but not to mortality of host corals. Marine Ecology Progress Series, 394. pp. 215-222.
Hoogenboom, Mia O., Connolly, Sean R., and Anthony, Kenneth R.N. (2009) Effects of photoacclimation on the light niche of corals: a process-based approach. Marine Biology, 156 (12). pp. 2493-2503.
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Kosnik, Mathew, Hua, Quan, Kaufman, Darrell S., and Wust, Raphael A. (2009) Taphonomic bias and time-averaging in tropical molluscan death assemblages: differential shell half-lives in Great Barrier Reef sediment. Paleobiology, 35 (4). pp. 565-586.
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Bellwood, David R., and Meyer, Christopher P. (2009) Endemism and evolution in the Coral Triangle: a call for clarity. Journal of Biogeography, 36 (10). pp. 2010-2012.
van Herwerden, Lynne, Aspden, William J., Newman, Stephen J., Pegg, Graham G., Briskey, Leica, and Sinclair, William (2009) A comparison of the population genetics of Lethrinus miniatus and Lutjanus sebae from the east and west coasts of Australia: evidence for panmixia and isolation. Fisheries Research, 100 (2). pp. 148-155.
Walker, Stefan P.W., and McCormick, Mark I. (2009) Sexual selection explains sex-specific growth plasticity and positive allometry for sexual size dimorphism in a reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1671). pp. 3335-3343.
McCormick, Mark I. (2009) Behaviourally Mediated Phenotypic Selection in a Disturbed Coral Reef Environment. PLoS ONE, 4 (9). p. 7096.
Stockwell, Brian, Jadloc, Claro Renato L., Abesamis, Rene A., Alcala, Angel C., and Russ, Garry R. (2009) Trophic and benthic responses to no-take marine reserve protection in the Philippines. Marine Ecology Progress Series, 389. pp. 1-15.
Cooper, T.F., Gilmour, J.P., and Fabricius, K.E. (2009) Bioindicators of changes in water quality on coral reefs: review and recommendations for monitoring programmes. Coral Reefs, 28 (3). pp. 589-606.
Edmunds, Richard C., Hillersøy, Grethe, Momigliano, Paolo, and Van Herwerden, Lynne (2009) Classic approach revitalizes genomics: complete characterization of a candidate gene for thermal adaptation in two coral reef fishes. Marine Genomics, 2 (3-4). pp. 215-222.
Cowman, Peter F., Bellwood, David R., and van Herwerden, Lynne (2009) Dating the evolutionary origins of wrasse lineages (Labridae) and the rise of trophic novelty on coral reefs. Molecular Phylogenetics and Evolution, 52 (3). pp. 621-631.
Munday, Philip L., Donelson, Jennifer M., Dixson, Danielle L. , and Endo, Geoff G.K. (2009) Effects of ocean acidification on the early life history of a tropical marine fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1671). pp. 3275-3283.
Lemberget, T., McCormick, M.I., and Wilson, D.T. (2009) Environmental influences on the replenishment of lizardfish (family Synodontidae) in Caribbean Panama. Coral Reefs, 28 (3). pp. 737-750.
Gotelli, Nicholas J., Anderson, Marti J., Hector, T. Arita, Chao, Anne, Colwell, Robert K., Connolly, Sean R., Currie, David J., Dunn, Robert R., Graves, Gary R., Green, Jessica L., Grytnes, John-Arvid, Jiang, Yi-Huei, Jetz, Walter, Lyons, S. Kathleen, McCain, Christy M., Magurran, Anne E., Rahbek, Carsten, Rangel, Thiago F.L.V.B., Soberón, Jorge, Webb, Campbell O., and Willig, Michael R. (2009) Patterns and causes of species richness: a general simulation model for macroecology. Ecology Letters, 12 (9). pp. 873-886.
Hobbs, J-P.A., Frisch, A.J., Hamanaka, T., McDonald, C.A., Gilligan, J.J., and Neilson, J. (2009) Seasonal aggregation of juvenile whale sharks (Rhincodon typus) at Christmas Island, Indian Ocean. Coral Reefs, 28 (3). p. 577.
Abrantes, Kátya, and Sheaves, Marcus (2009) Sources of nutrition supporting juvenile penaeid prawns in an Australian dry tropics estuary. Marine and Freshwater Research, 60 (9). pp. 949-959.
Nguyen, Thuy T.T., Davy, F. Brian, Rimmer, Michael A., and De Silva, Sena S. (2009) Use and exchange of genetic resources of emerging species for aquaculture and other purposes. Reviews in Aquaculture, 1 (3-4). pp. 260-274.
Pirozzi, Igor, and Booth, Mark A. (2009) The effect of temperature and body weight on the routine metabolic rate and postprandial metabolic response in mulloway, Argyrosomus japonicus. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 154 (1). pp. 110-118.
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Watson, Sue-Ann, Southgate, Paul C., Tyler, Paul A., and Peck, Lloyd (2009) Early larval development of the Sydney rock oyster Saccostrea glomerata under near-future predictions of CO2 driven ocean acidification. Journal of Shellfish Research, 28 (3). pp. 431-437.
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Kroon, F.J., Munday, P.L., and Westcott, D.A. (2009) Equivalent whole-body concentrations of 11-ketotestosterone in female and male coral goby (Gobiodon erythrospilus), a bi-directional sex-changing fish. Journal of Fish Biology, 75 (3). pp. 685-692.
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Abrego, David A., van Oppen, Madeleine J.H., and Willis, Bette L. (2009) Onset of algal endosymbiont specificity varies among closely related species of Acropora corals during early ontogeny. Molecular Ecology, 18 (16). pp. 3532-3543.
Baker, Ron, and Sheaves, Marcus (2009) Refugees or ravenous predators: detecting predation on new recruits to tropical estuarine nurseries. Wetlands Ecology and Management, 17 (4). pp. 317-330.
Mamangkey, N. Gustaf F., and Southgate, Paul C. (2009) Regeneration of excised mantle tissue by the silver-lip pearl oyster, Pinctada maxima (Jameson). Fish and Shellfish Immunology, 27 (2). pp. 164-174.
Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Liying, Sui, Southgate, Paul, Zhou, Gang, and Bian, Wenji (2009) Reproductive performance and offspring quality of Chinese mitten crab Eriocheir sinensis (H. Milne-Edwards) females fed an optimized formulated diet and the razor clam Sinonovacula constricta. Aquaculture Research, 40 (12). pp. 1335-1349.
Slater, Matthew J., Jeffs, Andrew G., and Carton, Alexander G. (2009) The use of the waste from green-lipped mussels as a food source for juvenile sea cucumber, Australostichopus mollis. Aquaculture, 292 (3-4). pp. 219-224.
van Herwerden, Lynne, Choat, J. Howard, Newman, Stephen J., Leray, Mattieu, and Hillersoy, Grethe (2009) Complex patterns of population structure and recruitment of Plectropomus leopardus (Pisces: Epinephelidae) in the Indo-West Pacific: implications for fisheries management. Marine Biology, 156 (8). pp. 1595-1607.
Guy, Jeffrey A., Jerry, Dean R., and Rowland, Stuart J. (2009) Heterosis in fingerlings from a diallel cross between two wild strains of silver perch (Bidyanus bidyanus). Aquaculture Research, 40 (11). pp. 1291-1300.
Gagliano, Monica, and McCormick, Mark I. (2009) Hormonally mediated maternal effects shape offspring survival potential in stressful environments. Oecologia, 160 (4). pp. 657-665.
Brierley, Andrew S., and Kingsford, Michael J. (2009) Impacts of climate change on marine organisms and ecosystems. Current Biology, 19 (14). R602-R614.
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Cooper, Timothy F., and Ulstrup, Karin E. (2009) Mesoscale variation in the photophysiology of the reef building coral Pocillopora damicornis along an environmental gradient. Estuarine, Coastal and Shelf Science , 83 (2). pp. 186-196.
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Sheaves, Marcus, and Johnston, Ross (2009) Ecological drivers of spatial variability among fish fauna of 21 tropical Australian estuaries. Marine Ecology Progress Series, 385. pp. 245-260.
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Cantin, N.E., van Oppen, M.J.H., Willis, B.L., Mieog, J.C., and Negri, A.P. (2009) Juvenile corals can acquire more carbon from high-performance algal symbionts. Coral Reefs, 28 (2). pp. 405-414.
Jones, G.P., Almany, G.R., Russ, G.R., Sale, P.F., Steneck, R.S., Van Oppen, M.J.H., and Willis, B.L. (2009) Larval retention and connectivity among populations of corals and reef fishes: history, advances and challenges. Coral Reefs, 28 (2). pp. 307-325.
Gonzalez Cabello, Alonso, and Bellwood, David R. (2009) Local ecological impacts of regional biodiversity on reef fish assemblages. Journal of Biogeography, 36 (6). pp. 1129-1137.
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Littman, Raechel A., Willis, Bette L., Pfeffer, Christian, and Bourne, David G. (2009) Diversities of coral-associated bacteria differ with location, but not species, for three acroporid corals on the Great Barrier Reef. FEMS Microbiology Ecology, 68 (2). pp. 152-163.
Abrantes, Kátya, and Sheaves, Marcus (2009) Food web structure in a near-pristine mangrove area of the Australian Wet Tropics. Estuarine, Coastal and Shelf Science, 82 (4). pp. 597-607.
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Pratchett, M.S., Schenk, T.J., Baine, M., Syms, C., and Baird, A.H. (2009) Selective coral mortality associated with outbreaks of Acanthaster planci L. in Bootless Bay, Papua New Guinea. Marine Environmental Research, 67 (4-5). pp. 230-236.
Romano, Nicholas, and Zeng, Chaoshu (2009) Subchronic exposure to nitrite, potassium and their combination on survival, growth, total haemocyte count and gill structure of juvenile blue swimmer crabs, Portunus pelagicus. Ecotoxicology and Environmental Safety, 72 (4). pp. 1287-1295.
de Nys, R., and Guenther, J. (2009) The impact and control of biofouling in marine finfish aquaculture. In: Hellio, Claire, and Yebra, Diego, (eds.) Advances in Marine Antifouling Coatings and Technologies. Woodhead Publishing, Cambridge,UK, pp. 177-221.
Hobbs, Jean-Paul A., Frisch, Ashley J., Allen, Gerald R., and van Herwerden, Lynne (2009) Marine hybrid hotspot at Indo-Pacific biogeographic border. Biology Letters, 5 (2). pp. 258-261.
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Romano, Nicholas, and Zeng, Chaoshu (2009) Evaluating the newly proposed protocol of incorporated potassium in nitrate toxicity experiments at different salinities: a case study with the tiger prawn, Penaeus monodon, juveniles. Aquaculture, 289 (3). pp. 304-309.
Planes, Serge, Jones, Geoffrey P., and Thorrold, Simon R. (2009) Larval dispersal connects fish populations in a network of marine protected areas. Proceedings of the National Academy of Sciences, 106 (14). pp. 5693-5697.
Lober, Malwine, and Zeng, Chaoshu (2009) Effect of microalgae concentration on larval survival, development and growth of an Australian strain of giant freshwater prawn Macrobrachium rosenbergii. Aquaculture, 289 (1). pp. 95-100.
Nankervis, L., and Southgate, P.C. (2009) Enzyme and acid treatment of fish meal for incorporation into formulated microbound diets for barramundi (Lates calcarifer) larvae. Aquaculture Nutrition, 15 (2). pp. 135-143.
Saenz-Agudelo, P., Jones, G.P., Thorrold, S.R., and Planes, S. (2009) Estimating connectivity in marine populations: an empirical evaluation of assignment tests and parentage analysis under different gene flow scenarios. Molecular Ecology, 18 (8). pp. 1765-1776.
Pirozzi, Igor, Booth, Mark A, and Pankhurst, Patricia M. (2009) The effect of stocking density and repeated handling on the growth of juvenile mulloway, Argyrosomus japonicus (Temminck & Schlegel 1843). Aquaculture International, 17 (2). pp. 199-205.
Pirozzi, Igor, and Booth, Mark A. (2009) The routine metabolic rate of mulloway (Argyrosomus japonicus: Sciaenidae) and yellowtail kingfish (Seriola lalandi: Carangidae) acclimated to six different temperatures. Comparative Biochemistry and Physiology: Part A, 152 (4). pp. 586-592.
Mamangkey, N. Gustav F., Acosta-Salmon, Hector, and Southgate, Paul C. (2009) Use of anaesthetics with the silver-lip pearl oyster, Pinctada maxima (Jameson). Aquaculture, 288 (3-4). pp. 280-284.
Kingsford, M.J. (2009) Contrasting patterns of reef utilization and recruitment of coral trout (Plectropomus leopardus) and snapper (Lutjanus carponotatus) at One Tree Island, southern Great Barrier Reef. Coral Reefs, 28 (1). pp. 251-264.
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Fauvelot, C., Smith-Keune, C., Jerry, D.R., Buston, P.M., and Planes, S. (2009) Isolation and characterization of 16 microsatellite loci in the humbug damselfish, Dascyllus aruanus (family Pomacentridae). Molecular Ecology Resources, 9 (2). pp. 651-653.
Cvitanovic, C., and Bellwood, D.R. (2009) Local variation in herbivore feeding activity on an inshore reef of the Great Barrier Reef. Coral Reefs, 28 (1). pp. 127-133.
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Haapkyla, Jessica, Seymour, Adrian S., Barneah, Orit, Brickner, Itzchak, Hennige, Sebastian, Suggett, David, and Smith, David (2009) Association of Waminoa sp. (Acoela) with corals in the Wakatobi Marine Park, South-East Sulawesi, Indonesia. Marine Biology, 156. pp. 1021-1027.
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Cano-Gómez, Ana, Bourne, David G., Hall, Michael R., Owens, Leigh, and Høj, Lone (2009) Molecular identification, typing and tracking of Vibrio harveyi in aquaculture systems: current methods and future prospects. Aquaculture, 287 (1-2). pp. 1-10.
Haynes, Gwilym D., Gongora, Jaime, Nicholas, Frank W., and Zenger, Kyall R. (2009) Rapid identification of maternal lineages in common carp (Cyprinus carpio L.) using real-time PCR and high resolution melt-curve analysis. Aquaculture, 287 (1-2). pp. 59-66.
Camus, Thomas, and Zeng, Chaoshu (2009) The effects of stocking density on egg production and hatching success, cannibalism rate, sex ratio and population growth of the tropical calanoid copepod Acartia sinjiensis. Aquaculture, 287 (1). pp. 145-151.
Kingsford, Michael J., Hughes, Julian M., and Patterson, Heather M. (2009) Otolith chemistry of the non-dispersing reef fish Acanthochromis polyacanthus: cross-shelf patterns from the central Great Barrier Reef. Marine Ecology Progress Series, 377. pp. 279-288.
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Morita, Masaya, Iguchi, Akira, and Takemura, Akihiro (2009) Roles of calmodulin and calcium/calmodulin-dependent protein kinase in flagellar motility regulation in the coral Acropora digitifera. Marine Biotechnology, 11 (1). pp. 118-123.
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Fisher, R., and Bellwood, D.R. (2002) A light trap design for stratum-specific sampling of reef fish larvae. Journal of Experimental Marine Biology and Ecology, 269 (1). pp. 27-37.
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Doroudi, Mehdi S., and Southgate, Paul C. (2002) The effect of chemical cues on settlement behaviour of blacklip pearl oyster (Pinctada margaritifera) larvae. Aquaculture, 209 (1-4). pp. 117-124.
Jompa, Jamaluddin, and McCook, Laurence J. (2002) The effects of nutrients and herbivory on competition between a hard coral (Porites cylindrica) and a brown alga (Lobophora variegata). Limnology and Oceanography, 47 (2). pp. 527-534.
Munday, P.L., and Molony, B.W. (2002) The energetic cost of protogynous versus protandrous sex change in the bi-directional sex-changing fish Gobiodon histrio. Marine Biology, 141 (6). pp. 1011-1017.
Marquez, L.M., van Oppen, M.J.H., Willis, B.L., Reyes, A., and Miller, D.J. (2002) The highly cross-fertile coral species, Acropora hyacinthus and Acropora cytherea, constitute statistically distinguishable lineages. Molecular Ecology, 11 (8). pp. 1339-1349.
Cimino, Elizabeth J., Owens, Leigh, Bromage, Erin, and Anderson, Trevor A. (2002) A newly developed ELISA showing the effect of environmental stress on levels of hsp86 in Cherax quadricarinatus and Penaeus monodon. Comparative Biochemistry and Physiology A - Molecular and Integrative Physiology, 132 (3). pp. 591-598.
Bellwood, Orpha (2002) The occurrence, mechanics and significance of burying behaviour in crabs (Crustacea: Brachyura). Journal of Natural History, 36 (10). pp. 1223-1238.
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Sheaves, Marcus (2001) Are there really few piscivorous fishes in shallow estuarine habitats? Marine Ecology-Progress Series, 222. pp. 279-290.
Wilson, Shaun K., Burns, Kathryn, and Codi, Susan (2001) Sources of dietary lipids in the coral reef blenny Salarias patzneri. Marine Ecology-Progress Series, 222. pp. 291-296.
Bay, L.K., Jones, G.P., and McCormick, M.I. (2001) Habitat selection and aggression as determinants of spatial segregation among damselfish on a coral reef. Coral Reefs, 20 (3). pp. 289-298.
Brodie, Gilianne D., Klussmann-Kolb, Annette, and Gosliner, Terrence M. (2001) Anatomy and histology of a new species of Enotepteron (Cephalaspidea: Gastropteridae) from tropical northeastern Australia. The Veliger, 44 (4). pp. 362-369.
Wilson, Shaun, Burns, Kathryn, and Codi, Susan (2001) Identifying sources of organic matter in sediments from a detritivorous coral reef fish territory. Organic Geochemistry, 32 (10). pp. 1257-1269.
Wilson, J.P., and Sheaves, M. (2001) Short-term temporal variations in taxonomic composition and trophic structure of a tropical estuarine fish assemblage. Marine Biology, 139 (4). pp. 787-796.
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Ferry-Graham, Lara A., Wainwright, Peter C., Westneat, Mark W., and Bellwood, David R. (2001) Modulation of prey capture kinematics in the cheeklined wrasse Oxycheilinus digrammus (Teleostei: Labridae). Journal of Experimental Zoology, 290 (2). pp. 88-100.
van Oppen, Madeleine J.H., McDonald, Brenda J., Willis, Bette, and Miller, David J. (2001) The evolutionary history of the coral genus Acropora (Scleractinia, Cnidaria) based on a mitochondrial and a nuclear marker: reticulation, incomplete lineage sorting, or morphological convergence? Molecular Biology and Evolution, 18 (7). pp. 1315-1329.
Adams, S., and Williams, A.J. (2001) A preliminary test of the transitional growth spurt hypothesis using the protogynous coral trout Plectropomus maculatus. Journal of Fish Biology, 59 (1). pp. 183-185.
Caley, M. Julian, Schwarzkopf, Lin, and Shine, Richard (2001) Does total reproductive effort evolve independently of offspring size? Evolution: international journal of organic evolution, 55 (6). pp. 1245-1248.
Lukoschek, Vimoksalehi, and McCormick, Mark I. (2001) Ontogeny of diet changes in a tropical benthic carnivorous fish, Parupeneus barberinus (Mullidae): relationship between foraging behaviour, habitat use, jaw size, and prey selection. Marine Biology, 138 (6). pp. 1099-1113.
Bellwood, David R., and Hughes, Terry P. (2001) Regional-scale assembly rules and biodiversity of coral reefs. Science, 292 (5521). pp. 1532-1534.
Ferry-Graham, Lara A., Wainwright, Peter C., Hulsey, C. Darrin, and Bellwood, David R. (2001) Evolution and mechanics of long jaws in butterflyfishes (Family Chaetodontidae). Journal of Morphology, 248 (2). pp. 120-143.
Pratchett, Morgan S. (2001) Influence of coral symbionts on feeding preferences of crown-of-thorns starfish Acanthaster planci in the western Pacific. Marine Ecology-Progress Series, 214. pp. 111-119.
Gust, Nick, Choat, J. Howard, and Mccormick, Mark I. (2001) Spatial variability in reef fish distribution, abundance, size and biomass : a multi-scale analysis. Marine Ecology Progress Series, 214. pp. 237-251.
Eagle, Janelle V., Jones, Geoffrey P., and McCormick, Mark I. (2001) A multi-scale study of the relationships between habitat use and the distribution and abundance patterns of three coral reef angelfishes (Pomacanthidae). Marine Ecology-Progress Series, 214. pp. 253-265.
Meekan, M.G., Ackerman, J.L., and Wellington, G.M. (2001) Demography and age structures of coral reef damselfishes in the tropical eastern Pacific Ocean. Marine Ecology-Progress Series, 212. pp. 223-232.
Stewart, B.D., and Jones, G.P. (2001) Associations between the abundance of piscivorous fishes and their prey on coral reefs: implications for prey-fish mortality. Marine Biology, 138 (2). pp. 383-397.
Ferry-Graham, Lara A., Wainwright, Peter C., and Bellwood, David R. (2001) Prey capture in long-jawed butterflyfishes (Chaetodontidae): the functional basis of novel feeding habits. Journal of Experimental Marine Biology and Ecology, 256 (2). pp. 167-184.
Baird, A.H., Sadler, C., and Pitt, M. (2001) Synchronous spawning of Acropora in the Solomon Islands. Coral Reefs, 19 (3). p. 286.
Schulz, Melissa K., and Alexander, C.G. (2001) Aggressive behaviour of Caprella Scaura Typica Mayer, 1890. (Crustacea: Amphipoda). Marine and Freshwater Behaviour and Physiology, 34 (3). pp. 181-187.
Molony, Brett W., and Sheaves, Marcus J. (2001) Challenges of external insemination in a tropical sparid fish, Acanthopagrus berda. Environmental Biology of Fishes, 61 (1). pp. 65-71.
Kritzer, J.P., Davies, C.R., and Mapstone, B.D. (2001) Characterizing fish populations: effects of sample size and population structure on the precision of demographic parameter estimates. Canadian Journal of Fisheries and Aquatic Sciences, 58 (8). pp. 1557-1568.
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Noonan, Sam Hamilton Croft (2022) Responses of corals and coral reef ecosystems to ocean acidification under variable temperature and light. PhD thesis, James Cook University.
Steinig, Eike Joachim (2021) Genomic epidemiology of community-associated Staphylococcus aureus in northern Australia and Papua New Guinea. PhD thesis, James Cook University.
Nayfa, Maria George (2020) Domestication in aquaculture fishes - elucidating the genetic consequences in Nile Tilapia (Oreochromis niloticus). PhD thesis, James Cook University.
Budd, Alyssa (2020) Epigenetic effects of temperature on sex change in barramundi, Lates calcarifer. PhD thesis, James Cook University.
Joyce, Melissa (2020) Understanding the nutritional requirements of redclaw (Cherax quadricarinatus): determining the apparent digestibility of raw materials and quantifying dietary lysine requirement. Masters (Research) thesis, James Cook University.
Sih, Tiffany L. (2019) Diving into the deep-end: investigating tropical deep-reef fish assemblages. PhD thesis, James Cook University.
Chakravarti, Leela J. (2019) Manipulation of coral photosymbionts for enhancing resilience to environmental change. PhD thesis, James Cook University.
McClure, Eva Claire (2019) No-take marine reserve performance under varying environmental and anthropogenic influences. PhD thesis, James Cook University.
Velu, Chinnathambi (2019) Potential of tropical filamentous cyanobacteria for low-cost bioremediation and bioproduct synthesis. PhD thesis, James Cook University.
Banh, Thi Quyen Quyen (2019) Sex differentiation of barramundi lates calcarifer – understanding male sexual development and its manipulation through exogenous steroids and non-steroidal aromatase inhibitor. PhD thesis, James Cook University.
Jurriaans, Saskia (2019) Thermal performance of scleractinian corals. PhD thesis, James Cook University.
Miller, Rachel Lynn (2019) Understanding stakeholder involvement in the policy and management of migratory taxa in the Australian marine environment: a case study approach. PhD thesis, James Cook University.
Loffler, Zoe (2019) The persistence of Sargassum communities on coral reefs: resilience and herbivory. PhD thesis, James Cook University.
Montanari, Stefano R. (2018) Causes and consequences of natural hybridisation among coral reef butterflyfishes (Chaetodon: Chaetodontidae). PhD thesis, James Cook University.
Vaughan, David Brendan (2018) Cleaner shrimp as biocontrols in aquaculture. PhD thesis, James Cook University.
MacDonald, Chancey (2018) Depth as refuge: depth gradients in ecological pattern, process, and risk mitigation among coral reef fishes. PhD thesis, James Cook University.
Johnson, Johanna (2018) Development and implementation of a vulnerability assessment tool to inform decision-making in socio-ecological systems. PhD thesis, James Cook University.
Jarrold, Michael D. (2018) Effects of diel CO₂ cycles on the early development and behaviour of coral reef fishes under ocean acidification. PhD thesis, James Cook University.
Trujillo-González, Alejandro (2018) Parasite threats from the ornamental fish trade. PhD thesis, James Cook University.
Bergseth, Brock J. (2018) Poaching in marine protected areas: drivers of and responses to illegal fishing. PhD thesis, James Cook University.
Noble, Tansyn Honi (2018) Selective breeding for tolerance to gill-associated virus in the black tiger shrimp, Penaeus monodon. PhD thesis, James Cook University.
Riskas, Kimberly Anne (2017) Addressing sources of data deficiency for sea turtles and fisheries in the Indian Ocean and Southeast Asia. PhD thesis, James Cook University.
Moorhead, Jonathan Allyn (2017) Broodstock management, development of rearing systems, and feeding regimes for larvae of the forktail blenny, Meiacanthus atrodorsalis. PhD thesis, James Cook University.
Hughes, Alec Tamana (2017) Demographic and reproductive characteristics of the squaretail coralgrouper (Plectropomus areolatus) in Solomon Islands. PhD thesis, James Cook University.
Nguyen Dinh Quang, Duy (2017) Developing hatchery culture of the tropical sea cucumber, Holothuria scabra, using micro-algae concentrates. PhD thesis, James Cook University.
Bastos Gomes, Giana (2017) Ecology and detection of harmful freshwater fish ciliate parasites Chilodonella spp. in aquaculture. PhD thesis, James Cook University.
Razaghi, Ali (2017) Evaluation of expression systems of recombinant human interferon gamma. PhD thesis, James Cook University.
Ram, Ravinesh (2017) Influence of processing techniques on quality and nutritional composition of the tropical sea cucumber Holothuria scabra. PhD thesis, James Cook University.
Matley, Jordan Kyle (2017) Investigation of coral trout (Plectropomus spp.) movement patterns and resource use: a multidisciplinary approach using acoustic telemetry and dietary indicators. PhD thesis, James Cook University.
Sparrow, Leanne (2017) Key factors influencing the occurrence and frequency of ciguatera. PhD thesis, James Cook University.
Nicolet, Katia Jane (2017) Vectors and environmental drivers of coral disease dynamics on the Great Barrier Reef. PhD thesis, James Cook University.
Brazenor, Alexander Karlis (2017) The biology of the cosmopolitan fish parasite Neobenedenia girellae. PhD thesis, James Cook University.
Militz, Thane A. (2017) A review of the Papua New Guinea marine aquarium fishery. PhD thesis, James Cook University.
Jones, Ben C. (2016) Addressing quality deficits in farmed barramundi: optimising flavour and quality through pre-harvest practices. PhD thesis, James Cook University.
Connolly, Niall Michael (2016) Bottom-up effects via heterotrophic pathways in invertebrate assemblages of tropical streams: nutrients, leaf litter and the relationship between productivity and diversity. PhD thesis, James Cook University.
Humanes Schumann, Adriana (2016) Combined effects of water quality and temperature on the early life history stages of the broadcast spawning coral Acropora tenuis. PhD thesis, James Cook University.
Emslie, Michael J. (2016) Effects of habitat versus fisheries management on spatio-temperal variation in fish assemblages on the Great Barrier Reef. PhD thesis, James Cook University.
Lienart, Govinda-Das Hugo (2016) Effects of temperature and food availability on the antipredator behaviour of juvenile coral reef fishes. PhD thesis, James Cook University.
Rocker, Melissa M. (2016) Effects of water quality on the health and condition of inshore corals. PhD thesis, James Cook University.
Brandl, Simon Johannes (2016) Functional niche partitioning in herbivorous coral reef fishes. PhD thesis, James Cook University.
Basiita, Rose Komugisha (2016) Genetic structure and biogeography of three commercially important African freshwater fishes: Lates niloticus, Bagrus docmak and Bagrus bayad. PhD thesis, James Cook University.
Lal, Monal M. (2016) Genetic structure, population connectivity and taxonomic identity of the black-lip pearl oyster Pinctada margaritifera (Bivalvia: Pteriidae), across its Indo-Pacific distribution. PhD thesis, James Cook University.
Boström Einarsson, Lisa (2016) Habitat degradation and competition for resources in coral reef fishes. PhD thesis, James Cook University.
Leahy, Susannah Marie (2016) Habitat determinants of Chaetodon butterflyfish and fishery-targeted coral reef fish assemblages in the central Philippines. PhD thesis, James Cook University.
Acheampong, Emmanuel Opoku (2016) Impact of roads on farm size, market participation, and forest cover change in rural Ghana. Masters (Research) thesis, James Cook University.
Ow, Yan Xiang (2016) Interactive effects of ocean acidification and declining water quality on tropical seagrass physiology. PhD thesis, James Cook University.
Collins, Geoffrey M. (2016) Phenotypic drivers of hypoxia tolerance in a tropical diadromous fish (Lates calcarifer). PhD thesis, James Cook University.
Poulos, Davina Elise (2016) Priority effects and the dynamics of coral reef fish assemblages. PhD thesis, James Cook University.
Dao, Hoc Tan (2016) Recruitment and genetic population genetics of spiny lobsters, Panulirus ornatus and P. homarus in the south-east Asian archipelago. PhD thesis, James Cook University.
Angell, Alex Raymond (2016) Seaweeds as an alternative crop for the production of protein. PhD thesis, James Cook University.
Gainsford, Ashton (2016) A multi-disciplinary evaluation of the hybrid anemonefish Amphiprion leucokranos: behaviour shaping evolutionary outcomes of hybridization. PhD thesis, James Cook University.
Berner, Florian (2015) Assessment & design of perfused microalgal biofilm cultivation processes. PhD thesis, James Cook University.
Trujillo González, Alejandro (2015) Behaviour, histopathology and immunobiology: interactions between the ectoparasite Neobenedenia (Monogenea: Capsalidae) and its host, Lates calcarifer (Perciformes: Latidae). Masters (Research) thesis, James Cook University.
Kramer, Michael John (2015) Crustacea on coral reefs: habitat associations and trophic relationships. PhD thesis, James Cook University.
Alajmi, Fahad F. (2015) Developing intensive culture techniques for the tropical copepod Parvocalanus crassirostris as a live feed for aquaculture. PhD thesis, James Cook University.
Stella, Jessica (2015) Effects of climate change-induced thermal stress and habitat degradation to the biodiversity and species composition of coral-associated invertebrates. PhD thesis, James Cook University.
Taylor, Brett McCully (2015) Environmental and fishery-induced effects on life histories and assemblages of parrotfishes. PhD thesis, James Cook University.
Thobejane, Tubake Refiloe (2015) Improvement of formulated feeds and feeding management for redclaw aquaculture in Australia. Masters (Research) thesis, James Cook University.
Lédée, Elodie Jacqueline Isabelle (2015) Improving understanding of spatial ecology through network analysis of acoustic monitoring data. PhD thesis, James Cook University.
Sheaves, Janine (2015) Influence of seasonal variability and salinity gradients on benthic invertebrate assemblages in tropical and subtropical Australian estuaries. PhD thesis, James Cook University.
Lober, Malwine (2015) Investigation of the aquaculture potential of an Australian freshwater prawn, Macrobrachium spinipes (Schenkel, 1902), with emphasis on spawning induction, larval and nursery culture. Masters (Research) thesis, James Cook University.
von Alvensleben, Nicolas (2015) Microalgal species prospecting and characterisation for salinity tolerance, nutrient remediation and bio-product potential. PhD thesis, James Cook University.
Rechetelo, Juliana (2015) Movement, habitat requirements, nesting and foraging site selection: a case study of an endangered granivorous bird, the Black-throated finch Poephila cincta cincta in north-eastern Australia. PhD thesis, James Cook University.
Jin, Young Koo (2015) Nature or nurture? Testing the correlation between stress tolerance and genotype in the coral Acropora millepora on the Great Barrier Reef. PhD thesis, James Cook University.
Gosch, Björn Jürgen (2015) Oil content and quality in tropical seaweeds. PhD thesis, James Cook University.
Jankowski, Matthew William (2015) Relationships among depth distributions, habitat specialisation and demography in coral reef fish communities. PhD thesis, James Cook University.
Lefèvre, Carine D. (2015) Small cryptic fishes on coral reefs: ecological effects of extreme life history traits. Masters (Research) thesis, James Cook University.
Shimada, Takahiro (2015) Spatial ecology and conservation of sea turtles in coastal foraging habitat. PhD thesis, James Cook University.
Hall, April Elizabeth (2015) Top-down control, trophic interactions, and the importance of predatory fishes on coral reefs. PhD thesis, James Cook University.
Rizzari, Justin R. (2015) Trophic impact of large predators on coral reefs and management implications. PhD thesis, James Cook University.
Robinson, Jan (2015) Vulnerability to fishing in reef fishes that aggregate. PhD thesis, James Cook University.
Pattiselanno, Freddy (2015) Wildlife hunting, alternative protein sources and biodiversity conservation on the Bird's Head Peninsula of West Papua, Indonesia. PhD thesis, James Cook University.
Schmidt, Katrin (2015) The ecological role of tadpoles in streams of the Australian Wet Tropics. PhD thesis, James Cook University.
Atherton, Jennifer Ann (2015) The effect of parental and embryonic predator environments on offspring. PhD thesis, James Cook University.
Allan, Bridie Jean Marie (2015) The effects of climate change on predator-prey interactions in coral reef fish. PhD thesis, James Cook University.
White, James Ryan (2015) The role of boldness and other personality traits in the ecology of juvenile marine fishes. PhD thesis, James Cook University.
Kerry, James Timothy (2015) The role of tabular structure in the ecology of large reef fishes. PhD thesis, James Cook University.
Casey, Jordan Marie (2015) The role of territorial grazers in coral reef trophic dynamics from microbes to apex predators. PhD thesis, James Cook University.
Hodge, Jennifer Reneé (2014) Biogeography and the evolution of coral reef fish species. PhD thesis, James Cook University.
Paley, Allison Susanna (2014) Colour polymorphism and its role in stress tolerance in the coral Acropora millepora on the Great Barrier Reef. PhD thesis, James Cook University.
van de Water, Johannes A.J.M. (2014) Corals under stress: a study of the coral innate immune system. PhD thesis, James Cook University.
Cowlishaw, Melissa (2014) Determinants of home range and territory size in coral reef fishes. PhD thesis, James Cook University.
Brooker, Rohan Maurice Ralfe (2014) Determinants of resource specialisation and its ecological consequences for the corallivorous filefish, Oxymonacanthus longirostris. PhD thesis, James Cook University.
Lema, Anaïs Kimberley (2014) Diversity, stability, and uptake of diazotrophic bacterial communities associated with corals of the Great Barrier Reef. PhD thesis, James Cook University.
Athauda, A.R. Saman Bandara (2014) Effect of culture environmental conditions on sex inversion of Asian seabass (barramundi), Lates calcarifer (Bloch). PhD thesis, James Cook University.
McLeod, Ian Michael (2014) Effects of ocean warming on the larval development of coral reef fishes. PhD thesis, James Cook University.
Domingos, Jose A.S. (2014) Filling in the gaps impeding the instigation of selective breeding programs in barramundi Lates calcarifer: fate of genetic diversity through to harvest, estimation of genetic parameters and early prediction of family growth based on cellular processes. PhD thesis, James Cook University.
Vučko, Matthew John (2014) Innovative antifouling technologies: microtexture and metal. PhD thesis, James Cook University.
Miller, Gabrielle May (2014) Intergenerational effects of climate change on a coral reef fish, Amphiprion melanopus. PhD thesis, James Cook University.
Adkins, Merritt Elizabeth (2014) Large bodied fish communities and drivers of use in the shallow waters of a coastal habitat mosaic. Masters (Research) thesis, James Cook University.
Huerlimann, Roger Stephan (2014) Microalgal lipid biosynthesis: phylogeny of acetyl-CoA carboxylase and gene expression patterns of key enzymes. PhD thesis, James Cook University.
Davis, Benjamin James (2014) Patterns and processes at multiple scales shape fish assemblage structure in tropical estuaries. PhD thesis, James Cook University.
Ma, Ka Yan (2014) Patterns and processes of diversification in groupers (family: Epinephelidae). PhD thesis, James Cook University.
Gordon, Matthew (2014) Quantifying ecological aspects of the seasonally abundant box jellyfish Chironex fleckeri within coastal and estuarine waters of Far North Queensland. PhD thesis, James Cook University.
Figa, Boga Soni (2014) Spatio-temporal dynamics and population biology of the Fly River Herring (Nematalosa papuensis): implications for freshwater lake management in Papua New Guinea. PhD thesis, James Cook University.
Mooney, Christopher James (2014) Statoliths of cubozoan jellyfishes: their utility to discriminate taxa and elucidate population ecology. PhD thesis, James Cook University.
Beeden, Roger John (2014) A dynamic understanding of coral reef health informs resilience-based management of the Great Barrier Reef. PhD thesis, James Cook University.
Abdul Wahab, Muhammad Azmi (2014) A holistic approach towards understanding population dynamics of a coral reef sponge. PhD thesis, James Cook University.
Welsh, Justin Quentin (2014) The spatial ecology of coral reef fishes. PhD thesis, James Cook University.
Heimann, Kirsten, Karthikeyan, Obulisamy Parthiba, Karthigeyan, C.P., and Cirés, Samuel (2013) A biotechnological approach to convert methane into bio-polymer. In: Posters from the Greenhouse 2013 Conference . From: Greenhouse 2013 Conference, 8-11 October 2013, Adelaide, SA, Australia. (Unpublished)
Heimann, Kirsten, Karthikayan, O. Parthiba, and Cirés, Samuel (2013) A biotechnological approach to mitigate green house gas emissions from coal mine ventilation air in Australia. In: UNSPECIFIED. . From: ICTW 2013: 1st International Conference on Technologies for Sustainable Waste Management in Developing Countries, 23-24 August 2013, Guntur, India. (Unpublished)
Cires, S., Alvarez Roa, C., Loza, V., Karthikeyan, O.P., and Heimann, K. (2013) Diazotrophic cyanobacteria for bioremediation of greenhouse gases in Australian coal mines: a promising source of biofuels and value-added products. In: UNSPECIFIED. From: 3rd International Conference on Algal Biomass, Biofuels and Bioproducts, 16-19 June 2013, Toronto, Canada. (Unpublished)
Ellison, Michael Brian (2013) Bioremediation of coal-fired power station waste water using freshwater filamentous algae from the genus Oedogonium. Masters (Research) thesis, James Cook University.
van der Meer, Martin H. (2013) Coming, going, gone?: Population connectivity and extinction risk in restricted range coral reef fishes on isolated islands. PhD thesis, James Cook University.
Beck, Emadch (2013) Comparative phylogeography of four Indo-Pacific scarine labrids: an insight into the evolutionary patterns of reef fish. PhD thesis, James Cook University.
MacIntosh, Hugh (2013) Competition and coexistence in tropical Australian shipworms. PhD thesis, James Cook University.
Warner, Patricia A. (2013) Evolutionary and ecological connectivity at hierarchical scales from sperm to species in the reef-building coral genus Seriatopora. PhD thesis, James Cook University.
Jones, David Byron (2013) Genomic resources and genetic dissection of complex quantitative traits in the silver-lipped pearl oyster, Pinctada maxima. PhD thesis, James Cook University.
Lamb, Joleah B. (2013) Influence of marine-based industries on coral health and disease. PhD thesis, James Cook University.
Newton, James Raymond (2013) Investigating the genetics of thermal tolerance and adaptation to temperature amongst populations of Australian barramundi (Lates calcarifer). PhD thesis, James Cook University.
Wu, Xugan (2013) Lipid nutrition of early life history of two commercially important tropical crustaceans, the blue swimmer crab (Portunus pelagicus) and the ornate rock lobster (Panulirus ornatus), with emphasis on highly unsaturated fatty acids. PhD thesis, James Cook University.
Lönnstedt, Oona Margareta (2013) Predator-prey interactions and the importance of sensory cues in a changing world. PhD thesis, James Cook university.
Raina, Jean-Baptiste (2013) Production and fate of dimethylsulfoniopropionate (DMSP) in reef-building corals and its integral role in coral health. PhD thesis, James Cook University.
Manassa, Rachel Penelope (2013) Social learning and its role in anti-predator behaviour by coral reef fishes. PhD thesis, James Cook University.
Stegemann, Krista Elizabeth (2013) Spatio-temporal patterns of faunal distribution along a near-pristine estuarine edge environment. Masters (Research) thesis, James Cook University.
Wenger, Amelia Scher (2013) Suspended sediment and its effects on the behavior and physiology of coral reef fishes. PhD thesis, James Cook University.
Goatley, Christopher Harry Robert (2013) The ecological role of sediments on coral reefs. PhD thesis, James Cook University.
Sato, Yui (2012) Ecology and microbiology of black band disease: new insights into the etiology of an old coral disease. PhD thesis, James Cook University.
Johansen, Jacob L. (2012) Energetics of habitat use in planktivorous coral reef fishes: does specialization confer sensitivity to changing environmental conditions? PhD thesis, James Cook University.
Torda, Gergely (2012) Genetic assessment of population structure and the origin of recruits in brooding corals: understanding population connectivity on the Great Barrier Reef on various timescales. PhD thesis, James Cook University.
Harrison, Hugo B. (2012) Genetic parentage analysis as a tool for measuring larval connectivity in a network of marine reserves. PhD thesis, James Cook University.
de Paula Silva, Pedro Henrique (2012) Green tide algae integrated aquaculture for nitrogen bioremediation. PhD thesis, James Cook University.
Templeman, Michelle Anne (2012) Investigating the potential of jellyfishes as marine biomonitors and bioindicators of metal pollution. PhD thesis, James Cook University.
Fingerlos, Franz Martin (2012) Long-term variations in bycatch reduction device (BRD) effectiveness and trawl catch rates in a tropical fish assemblage. Masters (Research) thesis, James Cook University.
Cetina Heredia, Paulina (2012) Modelling physical and biological drivers of larval retention in reef systems. PhD thesis, James Cook University.
Wen, Colin Kuo-Chang (2012) Recruitment hotspots in the ecology and management of large predatory fishes on coral reefs. PhD thesis, James Cook University.
Carl, Christina (2012) Surface-based technologies and the settlement of Mytilus galloprovincialis. PhD thesis, James Cook University.
Chua, Chia-Miin (2012) The effects of ocean acidification and warming on the early life history stages of corals. PhD thesis, James Cook University.
Graham, Erin Marie (2012) The energetics of scleractinian coral larvae and implications for dispersal. PhD thesis, James Cook University.
Camus, Thomas (2012) The improvement of copepods intensive culture protocols as live feeds for aquaculture hatcheries. PhD thesis, James Cook University.
Mitchell, Matthew David (2012) The role of chemical alarm cues in risk assessment and predator recognition in coral reef fishes. PhD thesis, James Cook University.
Fox, Rebecca J. (2012) The trophic and spatial ecology of rabbitfishes (Perciformes, Siganidae) on coral reefs. PhD thesis, James Cook University.
Tziouveli, Vasiliki (2011) Broodstock conditioning and larval rearing of the marine ornamental white-striped cleaner shrimp, Lysmata amboinensis (de Man, 1888). PhD thesis, James Cook University.
Donelson, Jennifer Marie (2011) Climate change and the future for coral reef fishes: the potential for acclimation. PhD thesis, James Cook University.
Howells, Emily (2011) Coral symbionts in warming seas: population dynamics, adaptation and acclimatisation of Symbiodinium. PhD thesis, James Cook University.
Cowman, Peter Francis (2011) Dating the evolutionary origins of coral reef fishes. PhD thesis, James Cook University.
Villacorta Rath, Ana Cecilia (2011) Determinants of selective mortality during the early life history of Spratelloides delicatulus in the northern Great Barrier Reef. Masters (Research) thesis, James Cook University.
Wassnig, Matthew (2011) Developing hatchery culture techniques for the winged pearl oyster, Pteria penguin (Röding, 1798). PhD thesis, James Cook University.
Haapkylä, Jessica (2011) Dynamics and drivers of coral disease on Indo-Pacific reefs. PhD thesis, James Cook University.
Botte, Emmanuelle (2011) Effects of pesticide exposure and thermal stress in a model tropical reef fish, the damselfish Acanthochromis polyacanthus. PhD thesis, James Cook University.
Kvingedal, Renate (2011) Environment, genes and the effects of genotype by environment (G x E) interactions, on the expression of commercially important traits in the silver-lipped pearl oyster, Pinctada maxima (Jameson). PhD thesis, James Cook University.
Horne, John Barton (2011) Evolutionary and ecological genetic patterns of widespread unicornfishes: investigations of the non-geographic clades phenomenon. PhD thesis, James Cook University.
McGinty, Erin Louise (2011) Genetic contribution to pearl formation. PhD thesis, James Cook University.
Ballagh, Debra Anne (2011) Intensive rearing techniques and feeding behaviour of larval and juvenile mulloway, Argyrosomus japonicus. PhD thesis, James Cook University.
De Santis, Christian (2011) Regulation of growth: understanding the myostatin functioning in two important aquaculture species, barramundi (Lates calcarifer) and black tiger shrimp (Penaeus monodon). PhD thesis, James Cook University.
Abesamis, Rene A. (2011) Replenishment and connectivity of reef fish populations in the central Philippines. PhD thesis, James Cook University.
Milione, Michael (2011) Reproduction and growth of the winged pearl oyster, Pteria penguin (Röding, 1798) in the Great Barrier Reef lagoon. PhD thesis, James Cook University.
Dixson, Danielle Lynn (2011) Smelling home: the use of olfactory cues for settlement site selection by coral reef fish larvae. PhD thesis, James Cook University.
Mat Noordin, Noordiyana (2011) Towards development of a formulated diet for blue swimmer crab, Portunus pelagicus with emphasis on lipid nutrition. PhD thesis, James Cook University.
Littman, Raechel (2011) The dynamics of bacterial populations associated with corals and the possible role of bacterial pathogens in coral bleaching. PhD thesis, James Cook University.
Luter, Heidi M. (2011) The effects of disease and stress on the microbial community of the sponge Ianthella basta. PhD thesis, James Cook University.
Devine, Brynn Michelle (2011) The effects of ocean acidification on habitat associations of coral reef fishes. Masters (Research) thesis, James Cook University.
Cumbo, Vivian Ruth (2011) The establishment and development of symbiosis in coral larvae. PhD thesis, James Cook University.
Palmer, Caroline V. (2010) Biological mechanisms of coral immunity. PhD thesis, James Cook University.
Nelson, P.N., Banabas, M., Webb, M.J., Sheaves, M., Huth, N., McNeill, A., Koczberski, G., Berthelsen, S., and Orrell, I. (2010) Environmental sustainability indicators for oil palm in Papua New Guinea – conceptual framework for a research and development project. In: Agri-environmental Indicators Workshop, associated with the 2nd International Conference on Oil Palm and the Environment (ICOPE). From: Agri-environmental Indicators Workshop, associated with the 2nd International Conference on Oil Palm and the Environment (ICOPE), 23-27 February 2010, Bali, Indonesia. (Unpublished)
Romano, Nicholas (2010) Investigating the survival, growth and osmoregulatory responses of blue swimmer crab, Portunus pelagicus, early juveniles to salinity and ammonia challenge. PhD thesis, James Cook University.
Pollock, Frederic Joseph (2010) Phylogeny of the coral pathogen Vibrio coralliilyticus and the development of a qPCR-based diagnostic assay for its detection. Masters (Research) thesis, James Cook University.
Peverell, Stirling Charles (2010) Sawfish (Pristidae) of the Gulf of Carpentaria, Queensland, Australia. Masters (Research) thesis, James Cook University.
Lee, Anne Michelle (2010) Spatio-temporal factors affecting the growth of cultured silver-lip pearl oyster, Pinctada maxima (Jameson) (Mollusca: Pteriidae) in West Papua, Indonesia. PhD thesis, James Cook University.
Fraser, Matthew Robert (2009) Egg predation at tropical reef fish spawning aggregation sites: trade-offs for fitness. PhD thesis, James Cook University.
Edmunds, Richard C. (2009) Evidence for thermal adaptation among geographically, genetically and thermally distinct populations of the Australian barramundi, Lates calcarifer (Bloch 1790): a multi-level approach. PhD thesis, James Cook University.
Williamson, David (2009) Fishery effects and benefits of marine protected areas within the Great Barrier Reef Marine Park. PhD thesis, James Cook University.
Evans, Richard (2009) No-take marine protected areas: abundance, biomass, batch fecundity and genetic connectivity of target species on the Great Barrier Reef. PhD thesis, James Cook University.
Walker, Stefan Peter William (2009) Phenotypic plasticity across natural- and sexual-selection gradients in a reef fish. PhD thesis, James Cook University.
Lind, Curtis E. (2009) Population genetics, phylogeography and the effects of aquaculture on genetic diversity of the silver-lipped pearl oyster, Pinctada maxima (Jameson). PhD thesis, James Cook University.
Holmes, Thomas (2009) Processes and mechanisms of predatory interactions on newly settled reef fish. PhD thesis, James Cook University.
Richards, Zoe Trisha (2009) Rarity in the coral genus Acropora: implications for biodiversity conservation. PhD thesis, James Cook University.
Pirozzi, Igor (2009) A factorial approach to defining the dietary protein and energy requirements of mulloway, Argyrosomus japonicus : optimising feed formulations and feeding strategies. PhD thesis, James Cook University.
Hoogenboom, Mia O. (2008) Physiological models of performance for scleractinian corals. PhD thesis, James Cook University.
Holme, May-Helen (2008) Towards development of a formulated diet for mud crab (Scylla serrata) larvae, with emphasis on lipid nutrition. PhD thesis, James Cook University.
Busilacchi, Sara (2008) The subsistence coral reef fish fishery in the Torres Strait: monitoring protocols and assessment. PhD thesis, James Cook University.
Sheaves, Marcus, Connolly, Rod, and Johnston, Ross (2007) Assessment of Techniques for Determining the Health of Tropical Estuarine Ecosystems. Report. Marine and Tropical Sciences Research Facility, Cairns. (Unpublished)
Ranatunga, R.R.M.K.P. (2007) Demographic patterns in coral reef fishes: biogeographic trends and fishing effects. PhD thesis, James Cook University.
Curley, Belinda G. (2007) Estimating dispersal and population connectivity for temperate reef fishes at multiple spatial scales. PhD thesis, James Cook University.
Bergenius, Mikaela A.J. (2007) Stock structure of a coral reef fish, Plectropomus leopardus: identification and implications for harvest strategy evaluation. PhD thesis, James Cook University.
Martínez-Fernández, Erika (2007) Use of tropical microalgae species as food for pearl oyster (Pinctada margaritifera L.) larvae. PhD thesis, James Cook University.
Feary, David A. (2007) The influence of coral degradation on tropical fish community structure. PhD thesis, James Cook University.
Louden, Daniel James (2006) Bath sponge aquaculture: aspects of culture and quality. Masters (Research) thesis, James Cook University.
Scardino, Andrew J. (2006) Biomimetic fouling control. PhD thesis, James Cook University.
Mutz, Stephanie J. (2006) Comparative growth dynamics of Acanthurid fishes. Masters (Research) thesis, James Cook University.
Lloyd, Julie Anne (2006) Demography of Pristipomoides multidens in northern Australia and a comparison within the Family Lutjanidae with respect to depth. PhD thesis, James Cook University.
Berumen, Michael Lee (2006) Influence of resource availability on lifehistory traits in coral-feeding butterflyfishes (Pisces: Chaetodontidae). PhD thesis, James Cook University.
Bendell, Barry E. (2006) Interactions amongst invertebrates, epiphytes, and seagrasses in tropical intertidal meadows. PhD thesis, James Cook University.
Ettinger-Epstein, Piers (2006) Natural products and their supply from the tropical sponge Luffariella variabilis. PhD thesis, James Cook University.
Eagle, Janelle Vinita (2006) Recruitment hotspots around a coral reef: the roles of hydrodynamics and habitats. PhD thesis, James Cook University.
Srinivasan, Maya (2006) Recruitment in time and space: the dynamics and distributions of reef fish populations on a low latitude coral reef. PhD thesis, James Cook University.
Sofonia, Jeremy (2006) Sediment responses of corals from inshore reefs, Great Barrier Reef, Australia. Masters (Research) thesis, James Cook University.
Depczynski, Martial (2006) Small cryptic fishes on coral reefs : a new perspective on reef fish ecology and life histories. PhD thesis, James Cook University.
Boyett, Holly Virginia (2006) The ecology and microbiology of black band disease and brown band syndrome on the Great Barrier Reef. Masters (Research) thesis, James Cook University.
Gagliano, Monica (2006) The role of early life history traits on the survival of a coral reef fish. PhD thesis, James Cook University.
Sapolu, Tebaua (2005) Age-based demography and reproductive ontogeny of angelfishes belonging to the family Pomacanthidae. Masters (Research) thesis, James Cook University.
Herbert, Brett (2005) Feeding and growth of golden perch (Macquaria ambigua), and assessment of its potential for aquaculture. PhD thesis, James Cook University.
Konow, Nicolai (2005) Feeding ecomorphology in angelfishes, f. Pomacanthidae: the implications of functional innovations on prey-dislodgement in biting reef fishes. PhD thesis, James Cook University.
Horne, Michael Gary (2005) Investigation into development and preparation of 'artificial' food particles for tropical rock lobster, Panulirus ornatus, phyllosoma. Masters (Research) thesis, James Cook University.
Marriott, Ross James (2005) Population biology, dynamics and their implications for management of red bass: a large, long-lived reef fish. PhD thesis, James Cook University.
Smith, Luke Darren (2005) Resilience and recovery of coral communities on an isolated reef system in Western Australia following a catastrophic mortality event. PhD thesis, James Cook University.
Flint, Nicole (2005) Sublethal effects of diel fluctuations in dissolved oxygen saturation on freshwater fishes from tropical Queensland. PhD thesis, James Cook University.
Gershwin, Lisa-ann (2005) Taxonomy and phylogeny of Australian cubozoa. PhD thesis, James Cook University.
Fulton, Christopher John (2005) Wave energy and the role of swimming in reef fish ecology. PhD thesis, James Cook University.
Claydon, John Alexander Brightman (2005) The structure and dynamics of spawning aggregations of coral reef fish. PhD thesis, James Cook University.
Wolstenholme, Jacqueline K. (2004) Analysis of intraspecific and interspecific variation using reproductive and molecular evidence to interpret evolutionary relationships in a scleractinian coral species complex. In: 10th International Coral Reef Symposium. p. 141. From: 10th International Coral Reef Symposium Abstracts: stability and degradation of coral reef ecosystems, 28 June - 2 July 2004, Okinawa, Japan. (Unpublished)
Wei, Nu-Wei V., Wallace, Carden C., Lin, Ho-I, Wolstenholme, Jackie, Dai, Chang-Feng, and Chen, Chaolun A. (2004) Evaluation of molecular makers for species phylogeny of genus Acropora (Cnidaria; Scleractinia; Acroporidae). In: 10th International Coral Reef Symposium. p. 141. From: 10th International Coral Reef Symposium Abstracts: stability and degradation of coral reef ecosystems, 28 June - 2 July 2004, Okinawa, Japan. (Unpublished)
Acosta-Salmon, Hector (2004) Broodstock management and egg quality of the pearl oysters Pinctada margaritifera and Pinctada fucata. PhD thesis, James Cook University.
Genodepa, Jerome (2004) Development of a formulated diet for mud crab, Scylla sewata, larvae. Masters (Research) thesis, James Cook University.
Harrington, Lindsay Mortan (2004) Ecology of crustose coralline algae; interactions with scleractinian corals and responses to environmental conditions. PhD thesis, James Cook University.
Pit, Josiah Henk (2004) Feasibility of Akoya pearl oyster culture in Queensland. PhD thesis, James Cook University.
Ceccarelli, Daniela Monica (2004) Herbivorous fishes as determinants of the structure of coral reef communities: farmers, foragers and their interactions. PhD thesis, James Cook University.
True, James (2004) Massive Porites corals as indicators of environmental changes. PhD thesis, James Cook University.
Rotmann, Sandra (2004) Tissue thickness as a tool to monitor the stress response of massive porites corals to turbidity impact on Lihir Island, Papua New Guinea. PhD thesis, James Cook University.
Badger, Amanda Catherine (2004) The effects of nutrition on reproduction in the Eastern Rainbowfish, Melanotaenia splendida splendida. Masters (Research) thesis, James Cook University.
Madin, Joshua Simon (2004) A mechanistic approach to understanding and predicting hydrodynamic disturbance on coral reefs. PhD thesis, James Cook University.
Laman Trip, Elisabeth Daniele (2004) A multi-scale analysis of population dynamics and sexual size dimorphism in a widely distributed coral reef fish family (Acanthuridae). Masters (Research) thesis, James Cook University.
Vallejo, Benjamin (2003) Biogeography of coral reef shore gastropods in the Philippines. PhD thesis, James Cook University.
Wolstenholme, Jacqueline Kerri (2003) Species boundaries in scleractinian corals: a case study of the Acropora humilis species group. PhD thesis, James Cook University.
Bastidas, Ana Carolina (2002) Population dynamics and genetic structure of locally dominant species on coral reefs: a case study of the soft corals Sinularia flexibilis and Clavularia koellikeri. PhD thesis, James Cook University.
Bellwood, Orpha (2002) Systematics, biogeography and functional morphology of the Box Crabs (Family Calappidae). PhD thesis, James Cook University.
Fisher, Rebecca (2002) The functional capabilities of reef fish larvae: implications for dispersal during the pelagic phase. PhD thesis, James Cook University.
Berkelmans, Ray (2001) Bleaching, upper thermal limits and temperature adaptation in reef corals. PhD thesis, James Cook University.
Jompa, Jamaluddin (2001) Interactions between macroalgae and scleractinian corals in the context of reef degradation. PhD thesis, James Cook University.
Baird, Andrew Hamilton (2001) The ecology of coral larvae: settlement patterns, habitat selection and the length of the larval phase. PhD thesis, James Cook University.
Wilson, Shaun Kevin (2001) An investigation into the trophic nature of small reef fish from the tribe Salariini, family Blenniidae. PhD thesis, James Cook University.
Chang, Marshall C. (2000) Improvement of culture techniques for the seahorse Hippocampus sp. Masters (Research) thesis, James Cook University.
Baird, A., Marshall, Paul, and Wolstenholme, Jackie (2000) Mass spawning of Acropora in the coral sea. In: Abstracts of the Ninth International Coral Reef Symposium. p. 95. From: World Coral Reefs in the New Millenium: bridging research and management for sustainable development, 23-27 October 2000, Bali, Indonesia. (Unpublished)
Wallace, C.C., Paulay, G., Hoeksema, B.W.H., Bellwood, D.R., Hutchings, P., Barber, P.H., Erdmann, M., and Wolstenholme, J. (2000) Nature and origins of unique high diversity reef faunas in the Bay of Tomini, Central Sulawesi: the ultimate "Centre of Diversity"? In: Abstracts of the Ninth International Coral Reef Symposium. p. 46. From: World Coral Reefs in the New Millenium: bridging research and management for sustainable development, 23-27 October 2000, Bali, Indonesia. (Unpublished)
Cavanagh, Jo-Anne Elizabeth (2000) Organochlorine insecticide usage in the sugar industry of the Herbert and Burdekin River regions: chemical, biological, and risk assessments. PhD thesis, James Cook University.
Samoilys, Melita Anne (2000) Reproductive dynamics of an exploited serranid on the Great Barrier Reef. PhD thesis, James Cook University.
Michalek-Wagner, Kirsten (1999) The chemical ecology of the soft coral-zooxanthellae association and its signficance to the bleaching process. PhD thesis, James Cook University.
Munday, Philip L. (1999) The relationship between habitat use and the population ecology of coral-dwelling fishes (genus Gobiodon). PhD thesis, James Cook University.
Syms, Craig (1998) Habitat association, disturbance dynamics, and the role of spatial scale in structuring coral reef fish assemblages. PhD thesis, James Cook University.
Hall, Vicki R (1998) Injury and regeneration of reef-crest corals at Lizard Island, Great Barrier Reef, Australia. PhD thesis, James Cook University.
Stewart, Bryce D. (1998) Interactions between piscivorous coral reef fish and their prey. PhD thesis, James Cook University.
van Herwerden, Lynne (1998) The trematode genera Paragonimus and Schistosoma in East Asia: molecular evolution, phylogeny and biogeography. PhD thesis, James Cook University.
Fisk, David Anthony (1997) The role of recruitment in coral community regeneration. PhD thesis, James Cook University.
Purcell, Steven William (1997) The role of sediments in epilithic algal communities on coral reefs. PhD thesis, James Cook University.
Zeller, Dirk Christoph (1996) Patterns of movement of Plectropomus leopardus (Serranidae) in relation to spawning aggregations and marine protected areas, as determined by ultrasonic telemetry. PhD thesis, James Cook University.
Beukers, Joanne S. (1996) The relative roles of recruitment and post-recruitment processes in the regulation of a coral reef damselfish population. PhD thesis, James Cook University.
Santurtun, Marina (1995) Catch structure and dynamics of Antillean "Z" traps on a coral reef: interaction between trap characteristics and fish behaviour. Masters (Research) thesis, James Cook University.
Sheaves, Marcus John (1995) Estuaries as juvenile habitats for lutjanid and serranid fishes in tropical northeastern Australia. PhD thesis, James Cook University.
St John, Jill (1995) Feeding ecology of the coral trout, Plectropomus leopardus (Serranidae), on the Great Barrier Reef, Australia. PhD thesis, James Cook University.
Davies, Campbell Robert (1995) Patterns of movement of three species of coral reef fish on the Great Barrier Reef. PhD thesis, James Cook University.
Newman, Stephen John (1995) Spatial variability in the distribution, abundance, growth, mortality and age structures of tropical snappers (Pisces: Lutjanidae) in the Central Great Barrier Reef, Australia. PhD thesis, James Cook University.
Alderslade, Philip Norman (1995) Taxonomic studies within the gorgonian family Isididae (Coelenterata: Octocorallia). PhD thesis, James Cook University.
Lheknim, Vachira (1995) An evaluation of the relative nursery value of sandy shore surf zones and estuary mouths in tropical North Queensland, Australia. PhD thesis, James Cook University of North Queensland.
Shand, Julia (1994) Changes in the visual system of teleost fishes during growth and settlement: an ecological perspective. PhD thesis, James Cook University.
Stobart, Ben (1994) Delimiting coral species using alternative techniques: Montipora digitata (Dana, 1846), a case study. PhD thesis, James Cook University.
Grutter, Alexandra Sara (1994) Parasites in the cleaning interactions between Labroides dimidiatus and fish. PhD thesis, James Cook University.
Green, Alison Lesley (1994) The early life history of labroid fishes at Lizard Island, Northern Great Barrier Reef. PhD thesis, James Cook University.
Butler, Ian Robert Jacques (1994) An investigation into what constitutes lethal wounding in Acanthaster planci and an assessment of the effects of regeneration on gonad production. Masters (Research) thesis, James Cook University of North Queensland.
Martin-Smith, Keith Michael (1994) The role of epifaunal crustaceans on Sargassum spp. at Magnetic Island, Great Barrier Reef, Australia. PhD thesis, James Cook University.
Ferreira, Beatrice Padovani (1993) Age, growth, reproduction and population biology of Plectropomus spp (Epinephelinae: Serranidae) on the Great Barrier Reef, Australia. PhD thesis, James Cook University.
Thorrold, Simon Robert (1993) Meso-scale patterns in the distribution of larval fishes across the central Great Barrier Reef lagoon and relationships with environmental variability. PhD thesis, James Cook University.
Molony, Brett Wymond (1993) The use of multiple indices in the description of growth in the tropical estuarine fish Ambassis vachelli, Richardson (Pisces: Chandidae), with reference to the effects of feeding history. PhD thesis, James Cook University.
van Woesik, Robert (1992) Ecology of coral assemblages on continental islands in the southern section of the Great Barrier Reef, Australia. PhD thesis, James Cook University.
Chongprasith, Pornsook (1992) Nutrient release and nitrogen transformations resulting from resuspension of Great Barrier Reef shelf sediments. PhD thesis, James Cook University of North Queensland.
McCormick, Mark Ian (1992) The influence of pelagic life history on the quality of tropical goatfish (family Mullidae) at settlement. PhD thesis, James Cook University.
Clements, Kendall David (1991) Gut microorganisms of surgeonfishes (family Acanthuridae). PhD thesis, James Cook University of North Queensland.
Cabanban, Annadel Salvio (1991) The dynamics of leiognathidae in a tropical demersal ichthyofaunal community. PhD thesis, James Cook University.
Fromont, Jane (1990) A taxonomic study of tropical marine sponges (Porifera: Demospongiae: Haplosclerida and Petrosida) using morphological, chemical and reproductive character sets. PhD thesis, James Cook University.
Willis, Bette Lynn (1987) Morphological variation in the reef corals Turbinaria esenterina and Pavona cactus: synthesis of transplant, histocompatibility, electrophoresis, growth, and reproduction studies. PhD thesis, James Cook University.
Babcock, Russell Clayton (1986) A comparison of the population ecology of reef flat corals of the family Faviidae (Goniastrea, Platygyra). PhD thesis, James Cook University.
Perez, Orpha Salatandre (1985) Studies on the biology of the Indo-Pacific sandy shore crab, Matuta lunaris Forskål (Brachyura: Calappidae). Masters (Research) thesis, James Cook University.
Bellwood, David Roy (1985) The functional morphology, systematics and behavioural ecology of parrotfishes (family Scaridae). PhD thesis, James Cook University.
Collins, John Douglas (1978) A study of the interactive biology of corals. PhD thesis, James Cook University.