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Cartwright, Paula J., Browne, Nicola K., Belton, David, Parnum, Iain, O'leary, Michael, Valckenaere, Jurgen, Fearns, Peter, and Lowe, Ryan (2023) Long-term spatial variations in turbidity and temperature provide new insights into coral-algal states on extreme/marginal reefs. Coral Reefs, 42. pp. 859-872.

Canning, Adam, and Duke, Norm (2022) Monitoring mangrove threats across the Torres Straits using remote-sensing. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Cleguer, Christophe (2022) Review of dugong detections from images collected during a dugong survey in New Caledonia. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Cartwright, Paula J., Fearns, Peter R.C.S., Branson, Paul, Cuttler, Michael V.W., O'Leary, Michael, Browne, Nicola K., and Lowe, Ryan J. (2021) Identifying Metocean Drivers of Turbidity Using 18 Years of MODIS Satellite Data: Implications for Marine Ecosystems under Climate Change. Remote Sensing, 13 (18). 3616.

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Canning, Adam D. (2018) Predicting New Zealand riverine fish reference assemblages. PeerJ, 6. e4890.

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Duvert, Clement, Lim, Han-She, Irvine, Dylan, Bird, Michael, Bass, Adrian, Tweed, Sarah, Hutley, Lindsay, and Munksgaard, Niels (2022) Hydrological processes in tropical Australia: Historical perspective and the need for a catchment observatory network to address future development. Journal of Hydrology: Regional Studies, 43. 101194.

Duke, Norman C., McKenzie, Jock, Canning, Adam, Kovacs, John, Cormier, Riley, and Castle, Ysabel (2022) PCPA CHAMP – Port Curtis and Port Alma coastal habitat archive and monitoring program – Final Report. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Diedrich, Amy, Duce, Stephanie, Eriksson, Hampus, Govan, Hugh, Harohau, Daykin, Koczberski, Gina, Lau, Jacqueline, Mills, David, Minter, Tessa, Steenbergen, Dirk, and Troell, Max (2022) An applied research agenda for navigating diverse livelihood challenges in rural coastal communities in the tropics. One Earth, 5 (11). pp. 1205-1215.

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de los Santos, Carmen, Scott, Abigail, Arias-Ortiz, Ariane, Jones, Benjamin, Kennedy, Hilary, Mazarrasa, Inés, McKenzie, Len, Nordlund, Lina, de la Torre-Castro, Maricela, Unsworth, Richard, and Ambo-Rappe, Rohani (2020) Seagrass ecosystem services: Assessment of scale and benefits. Report Section. UNEP, Nairobi, Kenya.

Dunn, Ryan J.K., Welsh, David T., Teasdale, Peter R., Gilbert, Franck, Poggiale, Jean-Christopher, and Waltham, Nathan J. (2019) Effects of the bioturbating marine yabby Trypaea australiensis on sediment properties in sandy sediments receiving mangrove leaf litter. Journal of Marine Science and Engineering, 7 (12). 426.

Devlin, Michelle J., Lyons, Brett P., Bacon, John, Edmonds, Nathan, Tracey, Dieter, Al Zaidan, Abdullah S., Al Ajmi, Fahad, Al-Wazzan, Zainab A., Al-Hussain, Mona M., Al Khaled, Hessa, and Le Quesne, Will J.F. (2019) Principles to enable comprehensive national marine ecosystem status assessments from disparate data: the state of the marine environment in Kuwait. Estuarine, Coastal and Shelf Science, 230. 106407.

Dunn, Ryan J.K., Waltham, Nathan J., Huang, Jianyin, Teasdale, Peter R., and King, Brian A. (2019) Protecting water quality in urban estuaries: Australian case studies. In: Wolanski, Eric, Day, John W., Elliott, Michael, and Ramachandran, Ramesh, (eds.) Coasts and Estuaries: the future. Elsevier, Oxford, United Kingdom, pp. 69-86.

Diedrich, Amy, Benham, Claudia, Pandihau, Lina, and Sheaves, Marcus (2019) Social capital plays a central role in transitions to sportfishing tourism in small-scale fishing communities in Papua New Guinea. Ambio, 48 (4). pp. 385-396.

Downs, N.J., Butler, H.J., Baldwin, L., Parisi, A.V., Amar, A., Vanos, J., and Harrison, S. (2019) A site-specific standard for comparing dynamic solar ultraviolet protection characteristics of established tree canopies. MethodsX, 6. pp. 1683-1693.

Dudley, Nigel, Day, Jon, Laffoley, Dan, Hockings, Marc, and Stolton, Sue (2017) Defining marine protected areas: A response to Horta e Costa et al. Marine Policy, 77. pp. 191-192.

Davis, Aaron M., Tink, Michelle, Rohde, Ken, and Brodie, Jon E. (2016) Urea contributions to dissolved 'organic' nitrogen losses from intensive, fertilised agriculture. Agriculture, Ecosystems and Environment, 223. pp. 190-196.

Davis, Aaron M., Unmack, Peterj., Vari, Richard P., and Betancur-R, Ricardo (2016) Herbivory promotes dental disparification and macroevolutionary dynamics in grunters (Teleostei: Terapontidae), a freshwater adaptive radiation. American Naturalist, 187 (3). pp. 320-333.

Davis, Aaron M., Pearson, Richard G., Brodie, Jon E., and Butler, Barry (2016) Review and conceptual models of agricultural impacts and water quality in waterways of the Great Barrier Reef catchment area. Marine and Freshwater Research, 68 (1). pp. 1-19.

Davies, Claire H., Coughlan, Alex, Hallegraeff, Gustaaf, Ajani, Penelope, Armbrecht, Linda, Atkins, Natalia, Bonham, Prudence, Brett, Steve, Brinkman, Richard, Burford, Michele, Clementson, Lesley, Coad, Peter, Coman, Frank, Davies, Diana, Dela-Cruz, Jocelyn, Devlin, Michelle, Edgar, Steven, Eriksen, Ruth, Furnas, Miles, Hassler, Christel, Hill, David, Holmes, Michael, Ingleton, Tim, Jameson, Ian, Leterme, Sophie C., Lønborg, Christian, McLaughlin, James, McEnnulty, Felicity, Mckinnon, A. David, Miller, Margaret, Murray, Shauna, Nayar, Sasi, Patten, Renee, Pritchard, Tim, Proctor, Roger, Purcell-Meyerink, Diane, Raes, Eric, Rissik, David, Ruszczyk, Jason, Slotwinski, Anita, Swadling, Kerrie M., Tattersall, Katherine, Thompson, Peter, Thomson, Paul, Tonks, Mark, Trull, Thomas W., Uribe-Palomino, Julian, Waite, Anya M., Yauwenas, Rouna, Zammit, Anthony, and Richardson, Anthony J. (2016) A database of marine phytoplankton abundance, biomass and species composition in Australian waters. Scientific Data, 3. 160043. pp. 1-12.

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Engert, Jayden E. (2022) Could environmental and conservation sciences benefit from an anonymized journal?. Conservation Letters, 15 (4). e12909.

Ebner, B.C., Millington, M., Holmes, B.J., Wilson, D.T., Sydes, T., Bickel, T.O., Power, T., Hammer, M., Lach, L., Schaffer, J., Lymbery,, A., and Morgan, D. (2020) Scoping the biosecurity risks and appropriate management relating to the freshwater ornamental aquarium trade across northern Australia. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Ehara, Hiroshi, Yamamoto, Toshiki, Tsuchiya, Tohru, Naito, Hitoshi, Dowe, John L., McClatchey, Will C., Mishima, Takashi, Itaya, Akemi, Mizota, Chitoshi, Pasolon, Yulius B., Ala, Philimon, Tuiwawa, Marika, Naikatini, Alivereti, Rounds, Issac A., Foliga, Talie, Lui, Siosinamele, and Kwan, Samantha (2019) Phylogenetic study of Metroxylon Palms in Southeast Asia and Oceania based on 5S nrDNA spacer sequence data. Sago Palm, 26 (2). pp. 37-43.

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Field, Ashley Raymond, and Renner, Matt A.M. (2019) Rediscovered or reconsidered: the presumed extinct ferns and lycophytes of tropical Queensland, Australia. Australian Systematic Botany, 32 (2-3). pp. 111-122.

Fabricius, K.E., Logan, M., Weeks, S.J., Lewis, S.E., and Brodie, J. (2016) Changes in water clarity in response to river discharges on the Great Barrier Reef continental shelf: 2002-2013. Estuarine, Coastal and Shelf Science, 173. A1-A15.

Flores-de-Santiago, Francisco, Kovacs, John M., Wang, Jinfei, Flores-Verdugo, Francisco, Zhang, Chunhua, and González-Farías, Fernando (2016) Examining the influence of seasonality, condition, and species composition on mangrove leaf pigment contents and laboratory based spectroscopy data. Remote Sensing, 8 (3). 226. pp. 1-20.

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Grantham, R., Lau, J., Mills, D.J., and Cumming, G.S. (2022) Social and temporal dynamics mediate the distribution of ecosystem service benefits from a small-scale fishery. Ecosystems and People, 18 (1). pp. 15-30.

Gabela-Flores, María Virginia, and Diedrich, Amy (2021) Exploring leadership dynamics in community-based marine protected areas. Marine Policy, 129. 104569.

Gillies, Chris, McLeod, Ian, Alleway, Heidi K., Cook, Peter, Crawford, Christine, Creighton, Colin, Diggles, Ben, Ford, John, Hamer, Paul, Heller-Wagner, Gideon, Lebrault, Emma, Le Port, Agnes, Russell, Kylie, Sheaves, Marcus, and Warnock, Bryn (2018) Australian shellfish ecosystems: past distribution, current status and future direction. PLoS ONE, 13 (2).

Geldmann, Jonas, Coad, Lauren, Barnes, Megan D., Craigie, Ian D., Woodley, Stephen, Balmford, Andrew, Brooks, Thomas M., Hockings, Marc, Knights, Kathryn, Mascia, Michael B., McRae, Louise, and Burgess, Neil D. (2018) A global analysis of management capacity and ecological outcomes in terrestrial protected areas. Conservation Letters, 11 (3). e12434.

Gurtner, Yetta, and Vachette, Astrid (2017) Community post impact assessment - rapid appraisal: Tropical Cyclone Debbie, Whitsunday Coast, QLD, Australia 5-8 April 2017. External Commissioned Report. James Cook University, Townsville, QLD, Australia.

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Hill, Rosemary (2024) Anticipatory co-governance for human rights to sciences across knowledge systems. International Journal of Human Rights, 28 (3). pp. 335-353.

Holmes McHugh, Lucy Rosamund (2023) In danger? Climate crisis frames in polycentric World Heritage governance & the critical case of Australia's Great Barrier Reef. PhD thesis, James Cook University.

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Holmes McHugh, Lucy, Lemos, Maria Carmen, and Morrison, Tiffany Hope (2021) Risk? Crisis? Emergency? Implications of the new climate emergency framing for governance and policy. WIREs Climate Change, 12 (6). e736.

Hoffmann, L.R., and Rasheed, M.A. (2021) Weipa Dredge Material Placement Area Marine Macrophyte Assessment 2020. Report. TropWATER, Cairns, QLD, Australia.

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Iles, J.A., Cartwright, P., Johns, J., and Waltham, N.J. (2023) Quality control procedure for marine water quality logger data. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

International Atomic Energy Agency (2023) Towards Best Practices in Isotope-Enabled Hydrological Modelling Applications: final report of a coordinated research project. Report. International Atomic Energy Agency, Vienna, Austria.

Iles, Jordan, and Waltham, Nathan (2021) Whitsunday Water Quality Monitoring Blueprint for Tourism Operators: Final report. Report. James Cook University, Townsville, QLD, Australia. (Unpublished)

Iles, J.A., and Waltham, N.J. (2020) Whitsunday Water Quality Monitoring Blueprint for Tourism Operators: Quarterly update - July 2020: A Report for Reef Catchments (Mackay Whitsunday Isaac) Limited. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

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Jaffrés, Jasmine B.D., Cuff, Ben, Cuff, Chris, Knott, Matthew, and Rasmussen, Cecily (2022) Hydrological characteristics of Australia: national catchment classification and regional relationships. Journal of Hydrology, 612 (Part A). 127969.

Justine, Jean-lou, Marie, Amandine Delphine, Gastineau, Romain, Fourcade, Yoan, and Winsor, Leigh (2022) The invasive land flatworm Obama nungara in La Reunion, a French island in the Indian Ocean, the first report of the species for Africa. Zootaxa, 5154 (4). pp. 469-476.

Justine, Jean-Lou, Gey, Delphine, Vasseur, Julie, Thevenot, Jessica, Collis, Mathieu, and Winsor, Leigh (2021) Presence of the invasive land flatworm Platydemus manokwari (Platyhelminthes, Geoplanidae) in Guadeloupe, Martinique and Saint Martin (French West Indies). Zootaxa, 4951 (2). pp. 381-390.

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Karatela, Shamshad, Ward, Neil I., Paterson, Janis, and Zeng, Irene Suilan (2022) Environmental Influences on the Behavioural and Emotional Outcomes of Children: A Network Analysis. International Journal of Environmental Research and Public Health, 19 (14). 8479.

Kiatkoski Kim, Milena, Douglas, Michael M., Pannell, David, Setterfield, Samantha A., Hill, Rosemary, Laborde, Sarah, Perrott, Laura, Alvarez-Romero, Jorge G., Beesley, Leah, Canham, Caroline, and Brecknell, Anthea (2022) When to Use Transdisciplinary Approaches for Environmental Research. Frontiers in Environmental Science, 10. 840569.

Kleiber, Danika, Frangoudes, Katia, Snyder, Hunter, Choudhury, Afrina, Cole, Steven M., Soejima, Kumi, Pita, Cristina, Santos, Anna, McDougall, Cynthia, Petrics, Hajnalka, and Porter, Marilyn (2017) Promoting Gender Equity and Equality Through the Small-Scale Fisheries Guidelines: Experiences from Multiple Case Studies. In: Jentoft, Svein, Chuenpagdee, Ratana, Barragan-Paladines, Maria Jose, and Franz, Nicole, (eds.) The Small-Scale Fisheries Guidelines: global implementation. MARE Publication Series, 14 . Springer, Cham, Switzerland, pp. 737-759.

King, David, and Gurtner, Yetta (2017) Utilizing post‐disaster surveys to understand the social context of floods–experiences from Northern Australia. In: Molinari, Daniela, Menoni, Scira, and Ballio, Francesco, (eds.) Flood Damage Survey and Assessment: new insights from research and practice. Geophysical Monograph, 228 . AGU Wiley, Washington, DC, USA, pp. 107-120.

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Lim, HanShe, McCloskey, Gillian, and Wasson, Robert (2024) Documenting largest floods in the Wet Tropics catchments using geomorphology, hydrological and archival data. Report. QLD Department of Environment, Science and Innovation (QDESI), Brisbane, QLD, Australia.

Lim, Han She, Munksgaard, Niels C., and Bird, Michael I. (2022) Revisiting Michael Bonell's work on humid tropical rainforest catchments: Isotope tracers reveal seasonal shifts in catchment hydrology. Hydrological Processes, 36 (10). e14722.

Langlois, Lucas A., Collier, Catherine J., and McKenzie, Len J. (2022) Subtidal Seagrass Detector: Development and preliminary validation. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Lawless, Sarah, Song, Andrew M., Cohen, Philippa J., and Morrison, Tiffany H. (2020) Rights, equity and justice: a diagnostic for social meta-norm diffusion in environmental governance. Earth System Governance, 6. 100052.

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Molnár, Zsolt, Aumeeruddy-Thomas, Yildiz, Babai, Dániel, Díaz, Sandra, Garnett, Stephen T., Hill, Rosemary, Bates, Peter, Brondízio, Eduardo S., Cariño, Joji, Demeter, László, Fernández-Llamazares, Álvaro, Guèze, Maximilien, McElwee, Pamela, Öllerer, Kinga, Purvis, Andy, Reyes-García, Victoria, Samakov, Aibek, and Singh, Ranjay K. (2024) Towards richer knowledge partnerships between ecology and ethnoecology. Trends in Ecology and Evolution, 39 (2). pp. 109-115.

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Naing, Cho, Reid, Simon A., Aye, Saint Nway, Htet, Norah Htet, and Ambu, Stephen (2019) Risk factors for human leptospirosis following flooding: a meta-analysis of observational studies. PLoS ONE, 14 (5). e0217643.

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