A

Adzhar, Rahayu, Kelley, Douglas I., Dong, Ning, George, Charles, Torello Raventos, Mireia, Veenendaal, Elmar, Feldpausch, Ted R., Phillips, Oliver L., Lewis, Simon L., Sonké, Bonaventure, Taedoumg, Herman, Schwantes Marimon, Beatriz, Domingues, Tomas, Arroyo, Luzmila, Djagbletey, Gloria, Saiz, Gustavo, and Gerard, France (2022) MODIS Vegetation Continuous Fields tree cover needs calibrating in tropical savannas. Biogeosciences, 19. pp. 1377-1394.

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Abhik, Santra, Hope, Pandora, Hendon, Harry H., Hutley, Lindsay B., Johnson, Stephanie, Drosdowsky, Wasyl, Brown, Josephine R, and Duke, Norman C. (2021) Influence of the 2015–2016 El Niño on the record‑breaking mangrove dieback along northern Australia coast. Scientific Reports, 11. 20411.

Adegboye, Oyelola A., McBryde, Emma S., and Eisen, Damon P. (2020) Epidemiological analysis of association between lagged meteorological variables and pneumonia in wet-dry tropical North Australia, 2006–2016. Journal of Exposure Science & Environmental Epidemiology, 30. pp. 448-458.

Ayling, T., Ayling, A., Chartrand, K.M., and Rasheed, M.A. (2020) Port of Abbot Point Ambient Coral Monitoring Surveys: 2018-2019. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Ayling, T., Ayling, A., Chartrand, K.M., and Rasheed, M.A. (2020) Ports of Mackay and Hay Point Ambient Coral Monitoring Surveys: 2018-2019. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Amir, A. Aldrie, and Duke, Norman C. (2019) Distinct characteristics of canopy gaps in the subtropical mangroves of Moreton Bay, Australia. Estuarine, Coastal and Shelf Science, 222. pp. 66-80.

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Adame, Maria Fernanda, Arthington, Angela, Waltham, Nathan, Hasan, Syezlin, Selles, Amelia, and Ronan, Mike (2019) Managing threats and restoring wetlands within catchments of the Great Barrier Reef, Australia. Aquatic Conservation: marine and freshwater ecosystems, 29. pp. 829-839.

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Ayling, T., Ayling, A., Chartrand, K.M., and Rasheed, M.A. (2019) Ports of Mackay and Hay Point Ambient Coral Monitoring Surveys: 2017-2018. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Allan, Blake M., Nimmo, Dale G., Ierodiaconou, Daniel, VanDerWal, Jeremy, Koh, Lian Pin, and Ritchie, Euan G. (2018) Futurecasting ecological research: the rise of technoecology. Ecosphere, 9 (5). e02163.

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Adams, Vanessa M., Pressey, Robert L., and Álvarez-Romero, Jorge G. (2016) Using optimal land-use scenarios to assess trade-offs between conservation, development, and social values. PLoS ONE, 11 (6). e0158350.

B

Ban, Natalie C., Darling, Emily S., Gurney, Georgina G., Friedman, Whitney, Jupiter, Stacy D, Lestari, W. Peni, Yulianto, Irfan, Pardede, Sinta, Tarigan, Sukma A.R., Prihatiningsih, Puji, Mangubhai, Sangeeta, Naisilisili, Waisea, Dulunaqio, Sirilo, Naggea, Josheena, Ranaivoson, Ravaka, Agostini, Vera N., Ahmadia, Gabby, Blythe, Jessica, Campbell, Stuart J., Claudet, Joachim, Cox, Courtney, Epstein, Graham, Estradivari, Fox, Margaret, Gill, David, Himes-Cornell, Amber, Jonas, Harry, Mcleod, Elizabeth, Muthiga, Nyawira A., and McClanahan, Tim (2023) Effects of management objectives and rules on marine conservation outcomes. Conservation Biology, 37 (6). e14156.

Bainbridge, Zoe, Olley, Jon, Wilkinson, Scott, Bartley, Rebecca, Lewis, Stephen, Dougall, Cameron, Khan, Sana, Kuhnert, Petra, and Burton, Joanne (2023) Refining fine sediment source identification through integration of spatial modelling, concentration monitoring and source tracing: A case study in the Great Barrier Reef catchments. Science of the Total Environment, 10. 164731.

Bremner, Julie, Petus, Caroline, Dolphin, Tony, Hawes, Jon, Beguet, Benoît, and Devlin, Michelle J. (2023) A Seagrass Mapping Toolbox for South Pacific Environments. Remote Sensing, 15 (3). 834.

Bainbridge, Zoe, Lewis, Stephen, Stevens, Thomas, Petus, Caroline, Lazarus, Emily, Gorman, Jessica, and Smithers, Scott (2021) Measuring sediment grain size across the catchment to reef continuum: improved methods and environmental insights. Marine Pollution Bulletin, 168. 112339.

Bahadori, Mohammad, Chen, Chengrong, Lewis, Stephen, Boyd, Sue, Rashti, Mehran, Esfandbod, Maryam, Van Zwieten, Lukas, and Kuzyakov, Yakov (2021) Soil organic matter formation is controlled by the chemistry and bioavailability of organic carbon inputs across different land uses. Science of the Total Environment, 770. 145307.

Brodie, Sheryn, Allen-Ankins, Slade, Towsey, Michael, Roe, Paul, and Schwarzkopf, Lin (2020) Automated species identification of frog choruses in environmental recordings using acoustic indices. Ecological Indicators, 119. 106852.

Bryant, C.V., Wilkinson, J.S., Chartrand, K.M., van de Wetering, C., and Rasheed, M.A. (2020) Port of Townsville Seagrass Monitoring Program: Interim report: April 2020. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Brum, Fernanda T., Pressey, Robert L., Bini, Luis Mauricio, and Loyola, Rafael (2019) Forecasting conservation impact to pinpoint spatial priorities in the Brazilian Cerrado. Biological Conservation, 240. 108283.

Bryant, C.V., Wells, J.N., and Rasheed, M.A. (2019) Port of Townsville Annual Seagrass Monitoring Survey: October 2018. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bonnin, Lucas, Robbins, William D., Boussarie, Germain, Kiszka, Jeremy J., Dagorn, Laurent, Mouillot, David, and Vigliola, Laurent (2019) Repeated long-range migrations of adult males in a common Indo-Pacific reef shark. Coral Reefs, 38. pp. 1121-1132.

Brodie, Jon, Grech, Alana, Pressey, Bob, Day, John, Dale, Allan, Morrison, Tiffany, and Wenger, Amelia (2019) The future of the Great Barrier Reef: the water quality imperative. In: Wolanski, Eric, Day, John, Elliott, Mike, and Wenger, Amelia S., (eds.) Coasts and estuaries: The future. Elsevier, Kidlington, Oxon, UK, pp. 477-499.

Brown, Christopher J., and Hamilton, Richard J. (2018) Estimating the footprint of pollution on coral reefs with models of species turnover. Conservation Biology, 32 (4). pp. 949-958.

Banhalmi-Zakar, Zsuzsa, Gronow, Claire, Wilkinson, Lachlan, Bryan, Jenkins, Pope, Jenny, Squires, Geraldine, Witt, Kathy, Williams, Galina, and Womersley, Jon (2018) Evolution or revolution: where next for impact assessment? Impact Assessment and Project Appraisal, 36 (6). pp. 506-515.

Bryant, Catherine, Carter, Alex, Chartrand, Katie, Wells, Jaclyn, and Rasheed, Michael (2018) Gladstone Healthy Harbour Partnership 2018 Report Card, ISP011: seagrass. Report. James Cook University, Cairns, QLD, Australia.

Benham, Claudia F., and Hussey, Karen E. (2018) Mainstreaming deliberative principles in Environmental Impact Assessment: current practice and future prospects in the Great Barrier Reef, Australia. Environmental Science and Policy, 89. pp. 176-183.

Brown, Christopher J., Jupiter, Stacy D., Albert, Simon, Klein, Carissa J., Mangubhai, Sangeeta, Maina, Joseph M., Mumby, Peter, Olley, Jon, Stewart-Koster, Ben, Tulloch, Vivitskaia, and Wenger, Amelia (2017) Tracing the influence of land-use change on water quality and coral reefs using a Bayesian model. Scientific Reports, 7. 4740.

Balladares, C., Marin, E., Espinoza-Rodriguez, N., and Barrios Garrido, Hector (2017) Prevalence of fibropapillomatosis on stranded sea turtles in the Venezuelan coast. Revista Bio Ciencias, 4 (4). 04.04.021.

Boyero, Luz, Graça, Manuel A.S., Tonin, Alan M., Pérez, Javier, Swafford, Andrew J., Ferreira, Verónica, Landeira-Dabarca, Andrea, Alexandrou, Markos A., Gessner, Mark O., McKie, Brendan G., Albariño, Ricardo J., Barmuta, Leon A., Callisto, Marcos, Chará, Julián, Chauvet, Eric, Colón-Gaus, Checo, Dudgeon, David, Encalada, Andrea C., Figueroa, Ricardo, Flecker, Alexander S., Fleituch, Tadeusz, Frainer, André, Goncalves, José F., Helson, Julie E., Iwata, Tomoya, Mathooko, Jude, M'Erimba, Charles, Pringle, Catherine M., Ramírez, Alonso, Swan, Christopher M., Yule, Catherine M., and Pearson, Richard G. (2017) Riparian plant litter quality increases with latitude. Scientific Reports, 7. 10562.

Bland, Lucie M., Regan, Tracey J., Dinh, Minh Ngoc, Ferrari, Renata, Keith, David A., Lester, Rebecca, Mouillot, David, Murray, Nicholas J., Nguyen, Hoang Anh, and Nicholson, Emily (2017) Using multiple lines of evidence to assess the risk of ecosystem collapse. Proceedings of the Royal Society of London Series B, Biological Sciences, 284 (1863). 20170660.

Berry, Kathryn L.E., Hoogenboom, Mia O., Brinkman, Diane L., Burns, Kathryn A., and Negri, Andrew P. (2016) Effects of coal contamination on early life history processes of a reef-building coral, Acropora tenuis. Marine Pollution Bulletin, 114 (1). pp. 505-514.

Burns, Kathyrn A., and Jones, Ross (2016) Assessment of sediment hydrocarbon contamination from the 2009 Montara oil blow out in the Timor Sea. Environmental Pollution, 211. pp. 214-225.

Berry, Kathryn L.E., Hoogenboom, Mia O., Flores, Florita, and Negri, Andrew P. (2016) Simulated coal spill causes mortality and growth inhibition in tropical marine organisms. Scientific Reports, 6. 25894. pp. 1-8.

Banhalmi-Zakar, Zsuzsa (2016) The impact of bank lending on the environmental outcomes of urban development. Australian Planner, 53 (3). pp. 221-231.

C

Carter, A., McKenna, S., Rasheed, M.A., Taylor, H., van de Wetering, C., Chartrand, K., Reason, C., Collier, C., Shepherd, L., Mellors, J., McKenzie, L., Duke, N.C., Roelofs, A., Smit, N., Groom, R., Barrett, D., Evans, S., Pitcher, R., Murphy, N., Carlisle, M., David, M., Lui, S., Torres Strait Indigenous Rangers, and Coles, R.G. (2024) Seagrass spatial data synthesis from north-east Australia, Torres Strait and Gulf of Carpentaria, 1983 to 2022. Limnology and Oceanography Letters, 9 (1). pp. 7-22.

Cleguer, Christophe, Garrigue, Claire, Fuentes, Mariana M.P.B., Hamann, Mark, Payri, Claude, and Marsh, Helene (2024) Temporal changes in habitat use by dugongs in a spatially restricted coral reef environment. Pacific Conservation Biology, 30 (2). PC23036.

Cannon, Sara E., Donner, Simon D., Liu, Angela, González Espinosa, Pedro C., Baird, Andrew H., Baum, Julia K., Bauman, Andrew G., Beger, Maria, Benkwitt, Cassandra E., Birt, Matthew J., Chancerelle, Yannick, Cinner, Joshua E., Crane, Nicole L., Denis, Vianney, Depczynski, Martial, Fadli, Nur, Fenner, Douglas, Fulton, Christopher J., Golbuu, Yimnang, Graham, Nicholas A.J., Guest, James, Harrison, Hugo B., Hobbs, Jean-Paul A., Hoey, Andrew S., Holmes, Thomas H., Houk, Peter, Januchowski-Hartley, Fraser A., Jompa, Jamaluddin, Kuo, Chao-Yang, Limmon, Gino Valentino, Lin, Yuting V., McClanahan, Timothy R., Muenzel, Dominic, Paddack, Michelle J., Planes, Serge, Pratchett, Morgan S., Radford, Ben, Reimer, James Davis, Richards, Zoe T., Ross, Claire L., Rulmal Jr., John, Sommer, Brigitte, Williams, GarethJ., and Wilson, Shaun K. (2023) Macroalgae exhibit diverse responses to human disturbances on coral reefs. Global Change Biology, 29 (12). pp. 3318-3330.

Ceccarelli, Daniela M., Evans, Richard D., Logan, Murray, Jones, Geoffrey P., Puotinen, Marji, Petus, Caroline, Russ, Garry R., Srinivasan, Maya, and Williamson, David H. (2023) Physical, biological and anthropogenic drivers of spatial patterns of coral reef fish assemblages at regional and local scales. Science of the Total Environment, 904. 166695.

Cartwright, Paula, Waltham, Nathan, and Iles, Jordan (2023) Southern Mackay Ambient Marine Water Quality Monitoring Program: Annual Report 2021-2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Carter, A., Allan, S., Scott, A., Rasheed, M.A., and Torres Strait Regional Authority Land and Sea Rangers (2023) Torres Strait Seagrass Report Card 2023. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Cartwright, Paula, Waltham, Nathan, and Iles, Jordan (2023) Whitsunday Water Quality Monitoring Blueprint for Tourism Operators: Annual report 2021-2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Carter, Alex B., Coles, Rob, Jarvis, Jessie C., Bryant, Catherine V., Smith, Timothy M., and Rasheed, Michael A. (2023) A report card approach to describe temporal and spatial trends in parameters for coastal seagrass habitats. Scientific Reports, 13. 2295.

Canto, Marites Magno (2022) Benthic irradiance in the Great Barrier Reef: model, spatiotemporal patterns, and index of water quality. PhD thesis, James Cook University.

Chartrand, Katie, Mumby, Peter, Ridley, Andy, Roelfsema, Chris, and Uusitalo, Jasmina (2022) Great Reef Census – A scalable shared economy approach to reconnaissance survey reef ecosystems. In: [Presented at the Australian Marine Sciences Association 2022 Conference]. From: Australian Marine Science Association Conference 2022: Change and connections, 7-12 August 2022, Cairns, QLD, Australia.

Chartrand, K.M, and Scott, A. (2022) Pilot survey of deep-water seagrasses using the Great Reef Census framework. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Cartwright, Paula, Iles, Jordan, and Waltham, Nathan (2022) Port of Abbot Point Ambient Marine Water Quality Monitoring Program: Annual Report 2021-2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Cartwright, P., Iles, J.A., and Waltham, N.J. (2022) Port of Mackay and Hay Point Ambient Marine Water Quality Monitoring Program: Annual Report 2021-2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Carter, A., Hoffmann, L.R., Scott, A., David, M., Torres Strait Regional Authority Land and Sea Rangers, and Rasheed, M.A. (2022) Torres Strait Seagrass Report Card 2022. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Cleguer, Christophe, Kelly, Natalie, Tyne, Julian, Peel, David, and Hodgson, Amanda (2021) A Novel Method for Using Small Unoccupied Aerial Vehicles to Survey Wildlife Species and Model Their Density Distribution. Frontiers in Marine Science, 8. 640338.

Canning, Adam D., Joy, Michael K., and Death, Russell G. (2021) Nutrient criteria to achieve New Zealand’s riverine macroinvertebrate targets. PeerJ, 9. e11556.

Chartrand, K.N., Hoffmann, L.R., Ayling, A., and Ayling, T. (2021) Port of Abbot Point Ambient Coral Monitoring Surveys: 2020-2021. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Chartrand, K.M., Hoffmann, L.R., Ayling, A., and Ayling, T. (2021) Ports of Mackay and Hay Point Ambient Coral Monitoring Surveys: 2020-2021. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Chartrand, K.M., and Carter, A.B. (2021) Reef Restoration Foundation Fitzroy Island Coral Habitat Assessment: June 2021. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Castro-Sanguino, Carolina, Ortiz, Juan Carlos, Thompson, Angus, Wolff, Nicholas H., Ferrari, Renata, Robson, Barbara, Magno-Canto, Marites M., Puotinen, Marji, Fabricius, Katharina E., and Uthicke, Sven (2021) Reef state and performance as indicators of cumulative impacts on coral reefs. Ecological Indicators, 123. 107335.

Carter, Alex, Coles, Rob, Rasheed, Michael, and Collier, Catherine J. (2021) Seagrass communities of the Great Barrier Reef and their desired state: applications for spatial planning and management. Report. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

Carter, Alex B., McKenna, Skye A., Rasheed, Michael A., Collier, Catherine, McKenzie, Len, Pitcher, Roland, and Coles, Rob (2021) Synthesizing 35 years of seagrass spatial data from the Great Barrier Reef World Heritage Area, Queensland, Australia. Limnology and Oceanography Letters, 6 (4). pp. 216-226.

Carter, Alexandra, David, Madeina, Whap, Terrence, Hoffman, Luke, Scott, Abigail, and Rasheed, Michael (2021) Torres Strait Seagrass 2021 Report Card. Report. James Cook University, Cairns, QLD, Australia.

Collier, C.J., Langlois, L.M., McMahon, K.M., Udy, J., Rasheed, M., Lawrence, E., Carter, A.B., Fraser, M.W., and McKenzie, L.J. (2021) What lies beneath: predicting seagrass below-ground biomass from above-ground biomass, environmental conditions and seagrass community composition. Ecological Indicators, 121. 107156.

Canto, Marites M., Fabricius, Katharina E., Logan, Murray, Lewis, Stephen, McKinna, Lachlan I.W., and Robson, Barbara J. (2021) A benthic light index of water quality in the Great Barrier Reef, Australia. Marine Pollution Bulletin, 169. 112539.

Cumming, G.S., Epstein, G., Anderies, J.M., Apetrei, C.I., Baggio, J., Bodin, Ö., Chawla, S., Clements, H.S., Cox, M., Egli, L., Gurney, G.G., Lubell, M., Magliocca, N., Morrison, T.H., Müller, B., Seppelt, R., Schlüter, M., Unnikrishnan, H., Villamayor-Tomas, S., and Weible, C.M. (2020) Advancing understanding of natural resource governance: a post-Ostrom research agenda. Current Opinion in Environmental Sustainability, 44. pp. 26-34.

Chartrand, K.M., Fletcher-Leonhardt, J.D., and Rasheed, M.A. (2020) Green Island Jetty Repairs Coral Monitoring Report – December 2020. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Currey-Randall, Leanne M., Cappo, Mike, Simpfendorfer, Colin A., Farabaugh, Naomi F., and Heupel, Michelle R. (2020) Optimal soak times for Baited Remote Underwater Video Station surveys of reef-associated elasmobranchs. PLoS One, 15 (5). e0231688.

Chartrand, K.M., and Wilkinson, J. (2020) Port of Townsville Chanel Upgrade Project: Western Breakwater Seagrass Assessment April 2020. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Chartrand, K.M., Wilkinson, J.S., and Rasheed, M.A. (2020) Port of Townsville Seagrass Monitoring Program, interim report: Sept/Oct 2020. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Cockerell, Brayden, Pressey, Robert L., Grech, Alana, Álvarez-Romero, Jorge G., Ward, Trevor, and Devillers, Rodolphe (2020) Representation does not necessarily reduce threats to biodiversity: Australia's Commonwealth marine protected area system, 2012–2018. Biological Conservation, 252. 108813.

Carter, Alexandra, Mellors, Jane, Whap, Terrence, and Hoffman, Luke (2020) Torres Strait Seagrass 2020 Report Card. Report. James Cook University, Cairns, QLD, Australia.

Collier, C.J., Carter, A.B., Rasheed, M., McKenzie, L., Udy, J., Coles, R., Brodie, J., Waycott, M., O’Brien, K.R., Saunders, M., Adams, M., Martin, K., Honchin, C., Petus, C., and Lawrence, E. (2020) An evidence-based approach for setting desired state in a complex Great Barrier Reef seagrass ecosystem: a case study from Cleveland Bay. Environmental and Sustainability Indicators, 7. 100042.

Choongo, Progress, Eijdenberg, Emiel L., Lungu, John, Chabala, Mwansa, Taylor, Thomas K., and Masurel, Enno (2020) The influence of environmental pollution and drought on the satisfaction with life of entrepreneurs in Zambia's mining sector. In: Chaiechi, Taha, (ed.) Economic Effects of Natural Disasters: theoretical foundations, methods, and tools. Elsevier, London, UK, pp. 147-160.

Canning, Adam D., and Death, Russell G. (2019) Ecosystem health indicators - freshwater environments. In: Fath, Brian D., (ed.) Encyclopedia of Ecology. Elsevier, pp. 46-60.

Carter, Alex, Chartrand, Katie, Wells, Jaclyn, and Rasheed, Michael (2019) Gladstone Healthy Harbour Partnership 2019 Report Card, ISP011: seagrass. Report. James Cook University, Cairns, QLD, Australia.

Crosbie, Augustine J., Bridge, Tom C. L., Jones, Geoff, and Baird, Andrew H. (2019) Response of reef corals and fish at Osprey Reef to a thermal anomaly across a 30 m depth gradient. Marine Ecology - Progress Series, 622. pp. 93-102.

Chartrand, K., Wells, J., Carter, A., and Rasheed, M. (2019) Seagrasses in Port Curtis and Rodds Bay 2018: Annual long-term monitoring. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., Mellors, J.E., Reason, C., and Rasheed, M.A. (2019) Torres Strait Seagrass 2019 Report Card. Report. UNSPECIFIED, Cairns, QLD, Australia.

Choi, Chi-Yeung, Jackson, Micha V., Gallo-Cajiao, Eduardo, Murray, Nicholas J., Clemens, Robert S., Gan, Xiaojing, and Fuller, Richard A. (2018) Biodiversity and China's new Great Wall. Diversity and Distributions, 24 (2). pp. 137-143.

Carter, Alex, and Rasheed, Michael (2018) Mackay-Whitsunday 2017 Baseline Seagrass Survey: Marine Inshore South Zone. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Clements, Gopalsamy Reuben, Abdul Aziz, Sheema, Bulan, Ramy, Giam, Xingli, Bentraupperbaumer, Joan, Goosem, Miriam, Laurance, Susan, and Laurance, William F. (2018) Not everyone wants roads: assessing Indigenous people’s support for roads in a globally important tiger conservation landscape. Human Ecology, 46 (6). pp. 909-915.

Canning, Adam D. (2018) Predicting New Zealand riverine fish reference assemblages. PeerJ, 6. e4890.

Chartrand, K.M., Rasheed, M.A., and Carter, A.B. (2018) Seagrasses in Port Curtis and Rodds Bay 2017: annual long-term monitoring. Report. James Cook University, Cairns, QLD, Australia.

Carter, A.B., Mellors, J.E., and Rasheed, M.A. (2018) Torres Strait Seagrass 2018 Report Card. Report. James Cook University, Cairns, QLD, Australia.

Carter, A.B., and Rasheed, M.A. (2018) Torres Strait Seagrass Long-term Monitoring: dugong sanctuary, Dungeness Reef and Orman Reefs. Report. James Cook University, Cairns, QLD, Australia.

Caron, Alexandra G.M., Thomas, Colette R., Berry, Kathryn L.E., Motti, Cherie A., Ariel, Ellen, and Brodie, Jon E. (2018) Validation of an optimised protocol for quantification of microplastics in heterogenous samples: a case study using green turtle chyme. MethodsX, 5. pp. 812-823.

Carter, A.B., Collier, C., Rasheed, M.A., McKenzie, L., and Udy, J. (2018) A framework for defining seagrass habitat for the Great Barrier Reef, Australia. Report. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

Cheok, Jessica, Pressey, Robert L., Weeks, Rebecca, VanDerWal, Jeremy, and Storlie, Collin (2018) The plans they are a-changin': more frequent iterative adjustment of regional priorities in the transition to local actions can benefit implementation. Diversity and Distributions, 24 (1). pp. 48-57.

Carter, Alex, Davies, Jaclyn, Jarvis, Jessie, McCormack, Catherine, and Rasheed, Michael (2017) Development of a condition report card for variable and diverse seagrass meadows in ports. In: Proceedings of the Australasian Coasts & Ports 2017 Conference. pp. 1152-1158. From: Australasian Coasts & Ports 2017 Conference: working with nature, 21-23 June 2017, Cairns, QLD, Australia.

Chartrand, K.M., Bryant, C.V., Sozou, A., Ralph, P.J., and Rasheed, M.A. (2017) Final Report: Deep-water seagrass dynamics - Light requirements, seasonal change and mechanisms of recruitment. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, Wells, Jaclyn, and Rasheed, Michael (2017) Gladstone Healthy Harbour Partnership 2017 Report Card, ISP011: seagrass. Report. James Cook University, Cairns, QLD, Australia.

Cooke, Steven J., Birnie-Gauvin, Kim, Lennox, Robert J., Taylor, Jessica J., Rytwinski, Trina, Rummer, Jodie L., Franklin, Craig E., Bennett, Joseph R., and Haddaway, Neal R. (2017) How experimental biology and ecology can support evidence-based decision-making in conservation: avoiding pitfalls and enabling application. Conservation Physiology, 5 (1).

Chartrand, Katie, Wells, Jaclyn, and Rasheed, Michael (2017) Long-Term Seagrass Monitoring in Port Curtis and Rodds Bay: Quarterly Permanent Transect Monitoring, 2009 to 2016 – Final Report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., Wells, J.N., and Rasheed, M.A. (2017) Torres Strait Seagrass – Dungeness Reef Baseline Survey and Dugong Sanctuary Long-term Monitoring. Report. James Cook University, Cairns, QLD, Australia.

Clark, Tara R., Roff, George, Zhao, Jian-xin, Feng, Yue-xing, Done, Terence J., McCook, Laurence J., and Pandolfi, John M. (2017) U-Th dating reveals regional-scale decline of branching Acropora corals on the Great Barrier Reef over the past century. Proceedings of the National Academy of Sciences of the United States of America, 114 (39). pp. 10350-10355.

Connolly, Niall, Pearson, Richard, and Pearson, Benjamin (2016) Riparian vegetation and sediment gradients determine invertebrate diversity in streams draining an agricultural landscape. Agriculture, Ecosystems and Environment, 221. pp. 163-173.

Carter, A.B, and Rasheed, M.A. (2016) Assessment of Key Dugong and Turtle Seagrass Resources in North-west Torres Strait. Report. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

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