A

Atherton, Jennifer A., and McCormick, Mark I. (2020) Parents know best: transgenerational predator recognition through parental effects. PeerJ, 8. e9340.

B

Bairos-Novak, Kevin R. (2023) Demographic and evolutionary responses of reef-building corals to climate change. PhD thesis, James Cook University.

Bairos-Novak, Kevin R., Hoogenboom, Mia O., van Oppen, Madeleine J., and Connolly, Sean (2021) Coral adaptation to climate change: meta-analysis reveals high heritability across multiple traits. Global Change Biology, 27 (22). pp. 5694-5710.

Bernal, Moises A., Donelson, Jennifer M., Veilleux, Heather D., Ryu, Taewoo, Munday, Philip L., and Ravasi, Timothy (2018) Phenotypic and molecular consequences of stepwise temperature increase across generations in a coral reef fish. Molecular Ecology, 27 (22). pp. 4516-4528.

Bui, E.N., Thornhill, A.H., González-Orozco, C.E., Knerr, N., and Miller, J.T. (2017) Climate and geochemistry as drivers of eucalypt diversification in Australia. Geobiology, 15 (3). pp. 427-440.

Bellwood, David R., Goatley, Christopher H.R., and Bellwood, Orpha (2017) The evolution of fishes and corals on reefs: form, function and interdependence. Biological Reviews, 92 (2). pp. 878-901.

C

Chakravarti, Leela J., Beltran, Victor H., and van Oppen, Madeleine J.H. (2017) Rapid thermal adaptation in photosymbionts of reef-building corals. Global Change Biology, 23 (11). pp. 4675-4688.

D

Deng, Zhixiong, Yang, Wenwu, Blair, David, Hu, Wei, and Yin, Mingbo (2022) Diversity of Brachionus plicatilis species complex (Rotifera) in inland saline waters from China: Presence of a new mitochondrial clade on the Tibetan Plateau. Molecular Phylogenetics and Evolution, 171. 107457.

F

Ferreira, P., Kwan, G.T., Haldorson, S., Rummer, J.L., Tashiro, F., Castro, L.F.C., Tresguerres, M., and Wilson, J.M. (2022) A multi-tasking stomach: functional coexistence of acid-peptic digestion and defensive body inflation in three distantly related vertebrate lineages. Biology Letters, 18 (2). 20210583.

G

Goatley, Christopher H.R., Brandl, Simon J., Wroe, Stephen, and Bellwood, David R. (2020) Simple larvae sustain the world's smallest marine vertebrates. Coral Reefs, 40. pp. 75-82.

Gangur, Alex N., Seymour, Jamie E., Liddell, Michael J., Wilson, David, Smout, Michael J., and Northfield, Tobin D. (2018) When is overkill optimal? Tritrophic interactions reveal new insights into venom evolution. Theoretical Ecology, 11 (2). pp. 141-149.

Gibbin, Emma M., N'Siala, Gloria Massamba, Chakravarti, Leela J., Jarrold, Michael D., and Calosi, Piero (2017) The evolution of phenotypic plasticity under global change. Scientific Reports, 7. 17253.

H

Harding, H.R., Gordon, T.A.C., Wong, K., McCormick, M.I., Simpson, S.D., and Radford, A.N. (2020) Condition-dependent responses of fish to motorboats. Biology Letters, 16 (11). 20200401.

Hierro, José L., Eren, Özkan, Montesinos, Daniel, Andonian, Krikor, Kethsuriani, Liana, Özkan, Rabia, Diaconu, Alecu, Török, Katalin, Cavieres, Lohengrin, and French, Kristine (2020) Increments in weed seed size track global range expansion and contribute to colonization in a non-native region. Biological Invasions, 22 (3). pp. 969-982.

Huertas, Victor, and Bellwood, David R. (2018) Feeding innovations and the first coral-feeding fishes. Coral Reefs, 37 (3). pp. 649-658.

I

Irimia, Ramona E., Hierro, José L., Branco, Soraia, Sotes, Gastón, Cavieres, Lohengrin A., Eren, Özkan, Lortie, Christopher J., French, Kristine, Callaway, Ragan M., and Montesinos, Daniel (2021) Experimental admixture among geographically disjunct populations of an invasive plant yields a global mosaic of reproductive incompatibility and heterosis. Journal of Ecology, 109 (5). pp. 2152-2162.

J

Johansen, Jacob L., Nadler, Lauren E., Habary, Adam, Bowden, Alyssa J., and Rummer, Jodie (2021) Thermal acclimation of tropical coral reef fishes to global heat waves. eLife, 10. e59162.

Jurriaans, Saskia, and Hoogenboom, Mia O. (2020) Seasonal acclimation of thermal performance in two species of reef-building corals. Marine Ecology Progress Series, 635. pp. 55-70.

Jurriaans, S., and Hoogenboom, M.O. (2019) Thermal performance of scleractinian corals along a latitudinal gradient on the Great Barrier Reef. Philosophical Transactions of the Royal Society B: Biological Sciences, 374 (1778). 20180546.

Johnson, Martijn S., Kraver, Daniel W., Renshaw, Gillian M.C., and Rummer, Jodie L. (2016) Will ocean acidification affect the early ontogeny of a tropical oviparous elasmobranch (Hemiscyllium ocellatum)? Conservation Physiology, 4 (1). pp. 1-11.

K

Kang, Jingliang, Nagelkerken, Ivan, Rummer, Jodie L., Rodolfo-Metalpa, Riccardo, Munday, Philip L., Ravasi, Timothy, and Schunter, Celia (2022) Rapid evolution fuels transcriptional plasticity to ocean acidification. Global Change Biology, 28 (9). pp. 3007-3022.

Koza, Anna, Kusmierska, Anna, McLaughlin, Kimberley, Moshynets, Olena, and Spiers, Andrew J. (2017) Adaptive radiation of Pseudomonas fluorescens SBW25 in experimental microcosms provides an understanding of the evolutionary ecology and molecular biology of A-L interface biofilm formation. FEMS Microbiology Letters, 364 (12).

Knight, Kathryn, and Rummer, Jodie (2017) Early-career researchers: an interview with Jodie Rummer. The Journal of Experimental Biology, 220 (20). pp. 3608-3610.

L

Llewelyn, John, Macdonald, Stewart L., Moritz, Craig, Martins, Felipe, Hatcher, Amberlee, and Phillips, Ben L. (2018) Adjusting to climate: acclimation, adaptation and developmental plasticity in physiological traits of a tropical rainforest lizard. Integrative Zoology, 13 (4). pp. 411-427.

Llewelyn, John, Choyce, Neil C., Phillips, Benjamin L., Webb, Jonathan K., Pearson, David J., Schwarzkopf, Lin, and Shine, Richard (2018) Behavioural responses of an Australian colubrid snake (Dendrelaphis punctulatus) to a novel toxic prey item (the Cane Toad Rhinella marina). Biological Invasions, 20 (9). pp. 2507-2516.

Llewelyn, John, Macdonald, Stewart, Hatcher, Amberlee, Moritz, Craig, and Phillips, Ben L. (2017) Thermoregulatory behaviour explains countergradient variation in the upper thermal limit of a rainforest skink. Oikos, 126 (5). pp. 748-757.

M

Montalvo-Proano, Jose L. (2020) Beneficial acclimation and stress-hardening of corals to climate change conditions. PhD thesis, James Cook University.

McKnight, D. T., Nordine, J., Jerrett, B., Murray, M., Murray, P., Moss, R., Northey, M., Simard, N., Alford, R. A., and Schwarzkopf, L. (2020) Do morphological adaptations for gliding in frogs influence clinging and jumping? Journal of Zoology, 310 (1). pp. 55-63.

Moyano, Marta, Illing, Björn, Polte, Patrick, Kotterba, Paul, Zablotski, Yury, Gröhsler, Tomas, Hüdepohl, Patricia, Cooke, Steven J., and Peck, Myron A. (2020) Linking individual physiological indicators to the productivity of fish populations: a case study of Atlantic herring. Ecological Indicators, 113. 106146.

Macdonald, Stewart L., Llewelyn, John, and Phillips, Ben L. (2018) Using connectivity to identify climatic drivers of local adaptation. Ecology Letters, 21. pp. 207-216.

Macdonald, Stewart L., Llewelyn, John, Moritz, Craig, and Phillips, Ben L. (2017) Peripheral isolates as sources of adaptive diversity under climate change. Frontiers in Ecology and Evolution, 5. 88.

Montesinos, Daniel, Castro, Sílvia, and Rodríguez-Echeverría, Susana (2016) Two invasive acacia species secure generalist pollinators in invaded communities. Acta Oecologica, 74. pp. 46-55.

P

Purcell, Michaela F., Thornhill, Andrew, Wallenius, Thomas C., Yeates, David, and Rowell, David M. (2018) Plant host relationships of three lineages of the gall-inducing fly Fergusonina Malloch (Diptera: Fergusoninidae) on Eucalyptus L’He´rit. Arthropod-Plant Interactions, 12 (1). pp. 133-145.

Panagides, Nadya, Jackson, Timothy N.W., Ikonomopoulou, Maria P., Arbuckle, Kevin, Pretzler, Rudolf, Yang, Daryl C., Ali, Syed A., Koludarov, Ivan, Dobson, James, Sanker, Brittany, Asselin, Angelique, Santana, Renan C., Hendrikx, Iwan, van der Ploeg, Harold, Tai-A-Pin, Jeremie, van den Bergh, Romilly, Kerkkamp, Harald M.I., Vonk, Freek J., Naude, Arno, Strydom, Morne A., Jacobsz, Louis, Dunstan, Nathan, Jaeger, Marc, Hodgson, Wayne C., Miles, John, and Fry, Bryan G. (2017) How the cobra got its flesh-eating venom: cytotoxicity as a defensive innovation and its co-evolution with hooding, aposematic marking, and spitting. Toxins, 9 (3). 103.

Prazeres, Marina, Uthicke, Sven, and Pandolfi, John (2016) Changing light levels induce photo-oxidative stress and alterations in shell density of Amphistegina lobifera (Foraminifera). Marine Ecology Progress Series, 549. pp. 69-78.

Pike, David A., Clark, Rulon W., Manica, Andrea, Tseng, Hui Yun, Hsu, Jung Ya, and Huang, Wen San (2016) Surf and turf: predation by egg-eating snakes has led to the evolution of parental care in a terrestrial lizard. Scientific Reports, 6. pp. 1-7.

Payne, Nicholas, Iosilevskii, Gil, Barnett, Adam, Fischer, Chris, Graham, Rachel T., Gleiss, Adrian C., and Watanabe, Yuuki Y. (2016) Great hammerhead sharks swim on their side to reduce transport costs. Nature Communications, 7. 12289. pp. 1-5.

Q

Quigley, Kate M., Alvarez Roa, Carlos, Beltran, Victor H., Leggat, Bill, and Willis, Bette L. (2021) Experimental evolution of the coral algal endosymbiont, Cladocopium goreaui: lessons learnt across a decade of stress experiments to enhance coral heat tolerance. Restoration Ecology, 29 (3). e13342.

Quigley, Kate, Bay, Line K., and van Oppen, Madeleine J. H. (2020) Genome-wide SNP analysis reveals an increase in adaptive genetic variation through selective breeding of coral. Molecular Ecology, 29 (12). pp. 2176-2188.

R

Rowell, Misha K., and Rymer, Tasmin L. (2023) Problem solving of wild animals in the Wet Tropics of Queensland, Australia. Austral Ecology, 48 (2). pp. 313-322.

Rochais, Celine, Rymer, Tasmin L., and Pillay, Neville (2022) Challenges in Linking Cognition and Survival: A Review. Frontiers in Ecology and Evolution, 10. 729546.

Rymer, Tasmin Lee, Rimbach, Rebecca, and Pillay, Neville (2022) Editorial: Proximate and ultimate approaches to behavior in a changing world. Frontiers in Ecology and Evolution, 10. 1064923.

Riedel, Jendrian, Zozaya, Stephen M., Hoskin, Conrad J., and Schwarzkopf, Lin (2021) Parallel evolution of toepads in rock-dwelling lineages of a terrestrial gecko (Gekkota: Gekkonidae: Heteronotia binoei). Zoological Journal of the Linnean Society, 193 (2). pp. 636-654.

Rymer, T. L, and Pillay, N. (2018) An integrated understanding of paternal care in mammals: lessons from the rodents. Journal of Zoology, 306 (2). pp. 69-76.

Rummer, Jodie L. (2017) What if you can't sense your enemy... and your enemy is an invasive predator? Conservation Physiology, 5 (1).

Rymer, Tasmin L., Pillay, Neville, and Schradin, Carsten (2016) Resilience to droughts in mammals: a conceptual framework for estimating vulnerability of a single species. Quarterly Review of Biology, 91 (2). pp. 133-176.

S

Siqueira Correa, Alexandre (2020) The evolution, macroecology and biogeography of coral reef fishes: a trophic perspective. PhD thesis, James Cook University.

Siqueira, Alexandre C., Bellwood, David R., and Cowman, Peter F. (2019) The evolution of traits and functions in herbivorous coral reef fishes through space and time. Proceedings of the Royal Society B, Biological Sciences, 286 (1897). 20182672.

Scheele, Benjamin C., Skerratt, Lee F., Hunter, David A., Banks, Sam C., Pierson, Jennifer C., Driscoll, Don A., Byrne, Philip G., and Berger, Lee (2017) Disease‑associated change in an amphibian life‑history trait. Oecologia, 184 (4). pp. 825-833.

Schöner, Caroline R., Schöner, Michael G., Grafe, T. Ulmar, Clarke, Charles M., Dombrowski, Linda, Tan, Moi Chan, and Kerth, Gerald (2017) Ecological outsourcing: a pitcher plant benefits from transferring pre-digestion of prey to a bat mutualist. Journal of Ecology, 105 (2). pp. 400-411.

Schmitz, Ulf, Pinello, Natalia, Jia, Fangzhi, Alasmari, Sultan, Ritchie, William, Keightley, Maria-Cristina, Shini, Shaniko, Lieschke, Graham J., Wong, Justin J-L., and Rasko, John E.J. (2017) Intron retention enhances gene regulatory complexity in vertebrates. Genome Biology, 18. 216.

Scheffer, S.J, Davies, K.A., Taylor, G.S., Thornhill, Andrew, Lewis, M.L., Winkler, I.S., Yeates, D.K., Purcell, M.F., Makinson, J., and Giblin-Davis, R.M. (2017) Phylogenetics of Australasian gall flies (Diptera: Fergusoninidae): evolutionary patterns of host-shifting and gall morphology. Molecular Phylogenetics and Evolution, 115. pp. 140-160.

Schunter, Celia, Welch, Megan J., Ryu, Taewoo, Zhang, Huoming, Berumen, Michael L., Nilsson, Goeran E., Munday, Philip L., and Ravasi, Timothy (2016) Molecular signatures of transgenerational response to ocean acidification in a species of reef fish. Nature Climate Change, 6 (11). pp. 1014-1018.

T

Tyagi, Anand, Dass, Crispin, Nathan, Subhashni, Racule, Timaima, and Lakhan, Sharonika (1995) Pollen fertility status in some flowering plant species of Fiji. South Pacific Journal of Natural Science, 14. pp. 211-222.

V

Van Dyke, James U., Thompson, Michael B., Burridge, Christopher P., Castelli, Meghan A., Clulow, Simon, Dissanayake, Duminda S.B., Dong, Caroline M., Doody, J. Sean, Edwards, Danielle L., Ezaz, Tariq, Friesen, Christopher R., Gardner, Michael G., Georges, Arthur, Higgie, Megan, Hill, Peta L., Holleley, Clare E., Hoops, Daniel, Hoskin, Conrad J., Merry, Deirdre L., Riley, Julia L., Wapstra, Erik, While, Geoffrey M., Whiteley, Sarah L., Whiting, Martin., Zozaya, Stephen M., and Whittington, Camilla (2021) Australian lizards are outstanding models for reproductive biology research. Australian Journal of Zoology, 68 (4). pp. 168-199.

van Oppen, Madeleine J.H., Gates, Ruth D., Blackall, Linda L., Cantin, Neal, Chakravarti, Leela J., Chan, Wing Y., Cormick, Craig, Crean, Angela, Damjanovic, Katarina, Epstein, Hannah, Harrison, Peter L., Jones, Thomas A., Miller, Margaret, Pears, Rachel J., Peplow, Lesa M., Raftos, David A., Schaffelke, Britta, Stewart, Kirsten, Torda, Gergely, Wachenfeld, David, Weeks, Andrew R., and Putnam, Hollie M. (2017) Shifting paradigms in restoration of the world's coral reefs. Global Change Biology, 23 (9). pp. 3437-3448.

Vickers, Mathew, and Schwarzkopf, Lin (2016) A random walk in the park: an individual-based null model for behavioral thermoregulation. American Naturalist, 187 (4). pp. 481-490.

W

Whitelaw, Brooke L., Jones, David B., Guppy, Jarrod, Morse, Peter, Strugnell, Jan M., Cooke, Ira R., and Zenger, Kyall (2022) High-Density Genetic Linkage Map of the Southern Blue-ringed Octopus (Octopodidae: Hapalochlaena maculosa). Diversity, 14 (12). 1068.

Whitelaw, Brooke L., Cooke, Ira R., Finn, Julian, Zenger, Kyall, and Strugnell, J.M. (2019) The evolution and origin of tetrodotoxin acquisition in the blue-ringed octopus (genus Hapalochlaena). Aquatic Toxicology, 206. pp. 114-122.

Z

Zhang, Jia (2023) Exploiting whole-genome sequencing to understand the evolution of corals and their symbionts. PhD thesis, James Cook University.

Zhang, Xiuping, Wolinska, Justyna, Blair, David, Hu, Wei, and Yin, Mingbo (2023) Responses to predation pressure involve similar sets of genes in two divergent species of Daphnia. Journal of Animal Ecology, 92 (9). pp. 1743-1758.

Zhang, Jia, Richards, Zoe T., Adam, Arne A.S., Chan, Cheong Xin, Shinzato, Chuya, Gilmour, James, Thomas, Luke, Strugnell, Jan M., Miller, David J., and Cooke, Ira (2022) Evolutionary Responses of a Reef-building Coral to Climate Change at the End of the Last Glacial Maximum. Molecular Biology and Evolution, 39 (10). msac201.

Zozaya, Stephen M., Higgie, Megan, Moritz, Craig, and Hoskin, Conrad J. (2019) Are pheromones key to unlocking cryptic lizard diversity? American Naturalist, 194 (2). pp. 168-182.

Zozaya, Stephen Michael (2019) Using pheromones to understand cryptic lizard diversity. PhD thesis, James Cook University.