Messer, Lauren F., Bourne, David G., Robbins, Steven J., Clay, Megan, Bell, Sara C., McIlroy, Simon J., and Tyson, Gene W. (2024) A genome-centric view of the role of the Acropora kenti microbiome in coral health and resilience. Nature Communications, 15. 2902.

Garcias-Bonet, Neus, Roik, Anna, Tierney, Braden, García, Francisca C., Villela, Helena D.M., Dungan, Ashley M., Quigley, Kate M., Sweet, Michael, Berg, Gabriele, Gram, Lone, Bourne, David G., Ushijima, Blake, Sogin, Maggie, Hoj, Lone, Duarte, Gustavo, Hirt, Heribert, Smalla, Kornelia, Rosado, Alexandre S., Carvalho, Susana, Thurber, Rebecca Vega, Ziegler, Maren, Mason, Christopher E., van Oppen, Madeleine J.H., Voolstra, Christian R., and Peixoto, Raquel S. (2024) Horizon scanning the application of probiotics for wildlife. Trends in Microbiology, 32 (3). pp. 252-269.

Ritter, Carmen J., and Bourne, David G. (2024) Marine amphipods as integral members of global ocean ecosystems. Journal of Experimental Marine Biology and Ecology, 572. 151985.

Bourne, David G., Sato, Yui, and Smith, Hillary A. (2024) Microbes guide corals looking to find a home. Trends in Microbiology, 32 (2). pp. 120-121.

Mason, Benjamin, Hayward, David C., Moya, Aurelie, Cooke, Ira, Sorenson, Alanna, Brunner, Ramona, Andrade Rodriguez, Natalia, Huerlimann, Roger, Bourne, David G., Schaeffer, Patrick, Grinblat, Mila, Ravasi, Timothy, Ueda, Nobuo, Tang, Sen-Lin, Ball, Eldon E., and Miller, David J. (2024) Microbiome manipulation by corals and other Cnidaria via quorum quenching. Current Biology, 34. pp. 3226-3232.

Neil, Rachel C., Barton, Jonathan A., Dougan, Winona, Dworjanyn, Symon, Heyward, Andrew, Mos, Benjamin, Bourne, David G., and Humphrey, Craig (2024) Size matters: Microherbivores make a big impact in coral aquaculture. Aquaculture, 581. 740402.

Marzonie, Magena R., Nitschke, Matthew R., Bay, Line K., Bourne, David G., and Harrison, Hugo B. (2024) Symbiodiniaceae diversity varies by host and environment across thermally distinct reefs. Molecular Ecology, 33 (9). e17342.

Voolstra, Christian R., Raina, Jean Baptiste, Dörr, Melanie, Cárdenas, Anny, Pogoreutz, Claudia, Silveira, Cynthia B., Mohamed, Amin R., Bourne, David G., Luo, Haiwei, Amin, Shady A., and Peixoto, Raquel S. (2024) The coral microbiome in sickness, in health and in a changing world. Nature Reviews Microbiology, 22. pp. 460-475.

Terzin, Marko, Laffy, Patrick W., Robbins, Steven, Yeoh, Yun Kit, Frade, Pedro R., Glasl, Bettina, Webster, Nicole S, and Bourne, David G. (2024) The road forward to incorporate seawater microbes in predictive reef monitoring. Environmental Microbiome, 19. 5.

Hermanto, B., Bourne, D.G., and Smith, H. (2023) Comparative image analysis approaches to assess ecological effects of macroalgal removal on inshore reefs of Magnetic Island, Australia. In: IOP Conference Series: Earth and Environmental Science (1137) 012052. From: MarBioUtiCoM: International Seminar on Marine Biodiversity, Utilization, Conservation and Management, 8-9 August 2022, Online.

Smith, Hillary A., Chen, Carla C. M., Pollock, F. Joseph, Re, Morgan, Willis, Bette L., and Bourne, David G. (2023) Drivers of coral mortality in non-acute disturbance periods. Marine Ecology Progress Series, 717. pp. 37-50.

Marangon, Emma, Uthicke, Sven, Patel, Frances, Marzinelli, Ezequiel M., Bourne, David G., Webster, Nicole S., and Laffy, Patrick W. (2023) Life-stage specificity and cross-generational climate effects on the microbiome of a tropical sea urchin (Echinodermata: Echinoidea). Molecular Ecology, 32 (20). pp. 5645-5660.

Saper, Julia, Høj, Lone, Humphrey, Craig, and Bourne, David G. (2023) Quantifying capture and ingestion of live feeds across three coral species. Coral Reefs, 42. pp. 931-943.

Smith, Hillary A., Fulton, Stella E., McLeod, Ian M., Page, Cathie A., and Bourne, David G. (2023) Sea-weeding: Manual removal of macroalgae facilitates rapid coral recovery. Journal of Applied Ecology, 60 (11). pp. 2459-2471.

O'Brien, Paul A., Tan, Shangjin, Frade, Pedro R., Robbins, Steven J., Engelberts, J. Pamela, Bell, Sara C., Vanwonterghem, Inka, Miller, David J., Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2023) Validation of key sponge symbiont pathways using genome-centric metatranscriptomics. Environmental Microbiology, 25 (12). pp. 3207-3224.

Li, Jie, Zou, Yiyang, Li, Qiqi, Zhang, Jian, Bourne, David G., Lyu, Yuanjiao, Liu, Cong, and Zhang, Si (2023) A coral-associated actinobacterium mitigates coral bleaching under heat stress. Environmental Microbiome, 18 (1). 83.

Arjunwadkar, Chaitanya, Tebbett, Sterling B., Bellwood, David, Bourne, David G., and Smith, Hillary A. (2022) Algal turf structure and composition vary with particulate loads on coral reefs. Marine Pollution Bulletin, 181. 113903.

McLeod, Ian M., Hein, Margaux Y., Babcock, Russell, Bay, Line, Bourne, David G., Cook, Nathan, Doropoulos, Christopher, Gibbs, Mark, Harrison, Peter, Lockie, Stewart, van Oppen, Madeleine J.H., Mattocks, Neil, Page, Cathie A., Randall, Carly J., Smith, Adam, Smith, Hillary A., Suggett, David J., Taylor, Bruce, Vella, Karen J., Wachenfeld, David, and Boström-Einarsson, Lisa (2022) Coral restoration and adaptation in Australia: The first five years. PLoS ONE, 17 (11). e0273325.

Li, Jie, Zou, Yiyang, Yang, Jian, Li, Qiqi, Bourne, David G., Sweet, Michael, Liu, Cong, Guo, Anjie, and Zhang, Si (2022) Cultured Bacteria Provide Insight into the Functional Potential of the Coral-Associated Microbiome. mSystems, 7 (4). e00327-22.

Kuek, Felicity, Motti, Cherie, Zhang, Jia, Cooke, Ira R., Todd, Jonathan D., Miller, David J., Bourne, David G., and Raina, Jean-Baptiste (2022) DMSP production by coral-associated bacteria. Frontiers in Marine Science, 9. 869574.

Bourne, David G, Smith, Hillary, and Page, Cathie (2022) Diseases of scleractinian corals. In: Rowley, Andrew F., Coates, Christopher J., and Whitten, Miranda W., (eds.) Invertebrate Pathology. Oxford University Press, Oxford, UK, pp. 77-108.

Wada, Naohisa, Hsu, Ming-Tsung, Tandon, Kshitij, Hsiao, Silver Sung-Yun, Chen, Hsing-Ju, Chen, Yu-Hsiang, Chiang, Pei-Wen, Yu, Sheng-Ping, Lu, Chih-Ying, Chiou, Yu-Jing, Tu, Yung-Chi, Tian, Xuejiao, Chen, Bi-Chang, Lee, Der-Chuen, Yamashiro, Hideyuki, Bourne, David G., and Tang, Sen-lin (2022) High-resolution spatial and genomic characterization of coral-associated microbial aggregates in the coral Stylophora pistillata. Science Advances, 8 (27). eabo2431.

Smith, Hillary A., Prenzlau, Tara, Whitman, Taylor, Fulton, Stella E., Borghi, Stefano, Logan, Murray, Heron, Scott F., and Bourne, David G. (2022) Macroalgal canopies provide corals limited protection from bleaching and impede post-bleaching recovery. Journal of Experimental Marine Biology and Ecology, 553. 151762.

Thatcher, Callaway, Hoj, Lone, and Bourne, David G. (2022) Probiotics for coral aquaculture: challenges and considerations. Current Opinion in Biotechnology, 73. pp. 380-386.

Smith, Hillary A., Brown, Dylan A., Arjunwadkar, Chaitanya V., Fulton, Stella E., Whitman, Taylor, Hermanto, Bambang, Mastroianni, Elissa, Mattocks, Neil, Smith, Adam K., Harrison, Peter L., Boström-Einarsson, Lisa, McLeod, Ian M., and Bourne, David G. (2022) Removal of macroalgae from degraded reefs enhances coral recruitment. Restoration Ecology, 30 (7). e13624.

Marzonie, Magena R., Bay, Line K., Bourne, David G., Hoey, Andrew S., Matthews, Samuel, Nielsen, Josephine J.V., and Harrison, Hugo B. (2022) The effects of marine heatwaves on acute heat tolerance in corals. Global Change Biology, 29 (2). pp. 404-416.

Thobor, Bianca, Tilstra, Arjen, Bourne, David G, Springer, Karin, Mezger, Selma Deborah, Struck, Ulrich, Bockelmann, Franziska, Zimmermann, Lisa, Yánez Suárez, Ana Belen, Klinke, Annabell, and Wild, Christian (2022) The pulsating soft coral Xenia umbellata shows high resistance to warming when nitrate concentrations are low. Scientific Reports, 12 (1). 16788.

Smith, Hillary A., Boström-Einarsson, Lisa, and Bourne, David G. (2022) A stratified transect approach captures reef complexity with canopy-forming organisms. Coral Reefs, 41. pp. 897-905.

Mason, B., Cooke, I., Moya, A., Augustin, R., Lin, M.F., Satoh, N., Bosch, T.C.G., Bourne, D.G., Hayward, D.C., Andrade, N., Forêt, S., Ying, H., Ball, E.E., and Miller, D.J. (2021) AmAMP1 from Acropora millepora and damicornin define a family of coral-specific antimicrobial peptides related to the Shk toxins of sea anemones. Developmental and Comparative Immunology, 114. 103866.

Neil, Rachel C., Humphrey, Craig, Bourne, David G., and Heyward, Andrew (2021) Co-culture with grazers can improve survival and growth of multiple coral species. Aquaculture, 544. 737095.

Voolstra, Christian R., Quigley, Kate M., Davies, Sarah W., Parkinson, John Everett, Peixoto, Raquel, Aranda, Manuel, Baker, Andrew C., Barno, Adam R., Barshis, Daniel J., Benzoni, Francesca, Bonito, Victor, Bourne, David G., Buitrago-López, Carol, Bridge, Tom C.L., Chan, Cheong Xin, Combosch, David J., Craggs, Jamie, Frommlet, Jörg C., Herrera, Santiago, Quattrini, Andrea M., Röthig, Till, Reimer, James D., Rubio-Portillo, Esther, Suggett, David J., Villela, Helena, Ziegler, Maren, and Sweet, Michael (2021) Consensus guidelines for advancing coral holobiont genome and specimen voucher deposition. Frontiers in Marine Science, 8. 701784.

Peixoto, Raquel S., Sweet, Michael, Villela, Helena D.M., Cardoso, Pedro, Thomas, Torsten, Voolstra, Christian R., Høj, Lone, and Bourne, David G. (2021) Coral probiotics: premise, promise, prospects. Annual Review of Animal Biosciences, 9. pp. 265-288.

Barton, Jonathan A., Neil, Rachel C., Humphrey, Craig, Bourne, David G., and Hutson, Kate S. (2021) Efficacy of chemical treatments for Acropora-eating flatworm infestations. Aquaculture, 532. 735978.

Voolstra, Christian R., Suggett, David J., Peixoto, Raquel S., Parkinson, John E., Quigley, Kate M., Silveira, Cynthia B., Sweet, Michael, Muller, Erinn M., Barshis, Daniel J., Bourne, David G., and Aranda, Manuel (2021) Extending the natural adaptive capacity of coral holobionts. Nature Reviews Earth and Environment, 2. pp. 747-762.

Sweet, Michael, Villela, Helena, Keller-Costa, Tina, Costa, Rodrigo, Romano, Stefano, Bourne, David G., Cárdenas, Anny, Huggett, Megan J., Kerwin, Allison H., Kuek, Felicity, Medina, Monica, Meyer, Julie L., Müller, Moritz, Pollock, F. Joseph, Rappé, Michael S., Sere, Mathieu, Sharp, Koty H., Voolstra, Christian R., Zaccardi, Nathan, Ziegler, Maren, and Peixoto, Raquel (2021) Insights into the cultured bacterial fraction of corals. mSystems, 6 (3). e01249-20.

Glasl, Bettina, Haskell, Jasmine B., Aires, Tania, Serrão, Ester, Bourne, David G., Webster, Nicole S., and Frade, Pedro R. (2021) Microbial surface biofilm responds to the growth-reproduction-senescence cycle of the dominant coral reef macroalgae sargassum spp. Life, 11 (11). 1199.

Marangon, Emma, Laffy, Patrick W., Bourne, David G., and Webster, Nicole S. (2021) Microbiome-mediated mechanisms contributing to the environmental tolerance of reef invertebrate species. Marine Biology, 168 (6). 89.

O'Brien, Paul A., Andreakis, Nikolaos, Tan, Shangjin, Miller, David, Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2021) Testing cophylogeny between coral reef invertebrates and their bacterial and archaeal symbionts. Molecular Ecology, 30 (15). pp. 3768-3782.

Gacesa, Ranko, Hung, Julia Yun-hsuan, Bourne, David G., and Long, Paul F. (2020) Horizontal transfer of a natterin-like toxin encoding gene within the holobiont of the reef building coral Acropora digitifera (Cnidaria:Anthozoa: Scleractinia) and across multiple animal linages. Journal of Venom Research, 10. pp. 7-12.

McLeod, Ian M., Bourne, David, Ceccarelli, Daniela M., Boström-Einarsson, Lisa, Cook, Nathan, Fulton, Stella E., Hancock, Boze, Harrison, Peter, Hein, Margaux, Le Port, Agnès, Paewai-Higgins, Roma, Smith, Hillary A., and Smith, Adam (2020) Best practice coral restoration for the Great Barrier Reef. Report. Reef and Rainforest Research Centre Limited (RRRC), Cairns, QLD, Australia.

Barton, Jonathan A., Humphrey, Craig, Bourne, David G., and Hutson, Kate S. (2020) Biological controls to manage Acropora-eating flatworms in coral aquaculture. Aquaculture Environment Interactions, 12. pp. 61-66.

Quigley, Kate M., Alvarez Roa, Carlos, Torda, Greg, Bourne, David G., and Willis, Bette L. (2020) Co-dynamics of Symbiodiniaceae and bacterial populations during the first year of symbiosis with Acropora tenuis juveniles. MicrobiologyOpen, 9 (2). e959.

Glasl, Bettina, Robbins, Steven, Frade, Pedro R., Marangon, Emma, Laffy, Patrick W., Bourne, David G., and Webster, Nicole N. (2020) Comparative genome-centric analysis reveals seasonal variation in the function of coral reef microbiomes. ISME Journal: multidisciplinary journal of microbial ecology, 14. pp. 1435-1450.

Siboni, Nachshon, Abrego, David, Puill-Stephan, Eneour, King, William L., Bourne, David G., Raina, Jean-Baptiste, Seymour, Justin R., and Harder, Tilmann (2020) Crustose coralline algae that promote coral larval settlement harbor distinct surface bacterial communities. Coral Reefs, 39 (6). pp. 1703-1713.

Assis, Juliana M., Abreu, Fernanda, Villela, Helena M.D., Barno, Adam, Valle, Rafael F., Vieira, Rayssa, Taveira, Igor, Duarte, Gustavo, Bourne, David G., Høj, Lone, and Peixoto, Raquel S. (2020) Delivering beneficial microorganisms for corals: rotifers as carriers of probiotic bacteria. Frontiers In Microbiology, 11. 608506.

O'Brien, Paul A., Tan, Shangjin, Yang, Chentao, Frade, Pedro R., Andreakis, Nikolaos, Smith, Hillary A., Miller, David J., Webster, Nicole S., Zhang, Guojie, and Bourne, David G. (2020) Diverse coral reef invertebrates exhibit patterns of phylosymbiosis. ISME Journal: multidisciplinary journal of microbial ecology, 14. pp. 2211-2222.

Mohamed, Amin R., Andrade, Natalia, Moya, Aurelie, Chan, Cheong Xin, Negri, Andrew P., Bourne, David G., Ying, Hua, Ball, Eldon E., and Miller, David J. (2020) Dual RNA-sequencing analyses of a coral and its native symbiont during the establishment of symbiosis. Molecular Ecology, 29 (20). pp. 3921-3937.

Yang, Chentao, Zheng, Yuxuan, Tan, Shangjin, Meng, Guanliang, Rao, Wei, Yang, Caiqing, Bourne, David G., O'Brien, Paul A., Xu, Junqiang, Liao, Sha, Chen, Ao, Chen, Xiaowei, Jia, Xinrui, Zhang, Ai-bing, and Liu, Shanlin (2020) Efficient COI barcoding using high throughput single-end 400 bp sequencing. BMC Genomics, 21. 862.

Smith, Hillary A., Conlan, Jessica A., Pollock, F. Joseph, Wada, Naohisa, Shore, Amanda, Hung, Julia Yun-Hsuan, Aeby, Greta S., Willis, Bette L., Francis, David S., and Bourne, David G. (2020) Energy depletion and opportunistic microbial colonisation in white syndrome lesions from corals across the Indo-Pacific. Scientific Reports, 10. 19990.

Cooke, Ira, Ying, Hua, Forêt, Sylvain, Bongaerts, Pim, Strugnell, Jan M., Simakov, Oleg, Zhang, Jia, Field, Matt A., Rodriguez-Lanetty, Mauricio, Bell, Sara C., Bourne, David G., van Oppen, Madeleine J.H., Ragan, Mark A., and Miller, David J. (2020) Genomic signatures in the coral holobiont reveal host adaptations driven by Holocene climate change and reef specific symbionts. Science Advances, 6 (48). eabc6318.

Marchioro, Giulia, Glasl, Bettina, Engelen, Aschwin H., Serrao, Ester A., Bourne, David G., Webster, Nicole S., and Frade, Pedro R. (2020) Microbiome dynamics in the tissue and mucus of acroporid corals differ in relation to host and environmental parameters. PeerJ, 8. e9644.

Barton, Jonathan A., Bourne, David G., Humphrey, Craig, and Hutson, Kate S. (2020) Parasites and coral-associated invertebrates that impact coral health. Reviews in Aquaculture, 12 (4). pp. 2284-2303.

Nielsen, J.J.V., Kenkel, C.D., Bourne, D.G., Despringhere, L., Mocellin, V.J.L., and Bay, L.K. (2020) Physiological effects of heat and cold exposure in the common reef coral Acropora millepora. Coral Reefs, 39 (2). pp. 259-269.

Wolfe, Kennedy, Anthony, Ken, Babcock, Russell C., Bay, Line, Bourne, David G., Burrows, Damien, Byrne, Maria, Deaker, Dione, Diaz-Pulido, Guillermo, Frade, Pedro, Gonzalez-Rivero, Manuel, Hoey, Andrew, Hoogenboom, Mia, McCormick, Mark, Ortiz, Juan Carlos, Razak, Tries, Richardson, Anthony J., Roff, George, Sheppard-Brennand, Hannah, Stella, Jessica, Thompson, Angus, Watson, Sue-Ann, Webster, Nicole, Audas, Donna, Beeden, Roger, Carver, Jesseca, Cowlishaw, Mel, Dyer, Michelle, Groves, Paul, Horne, Dylan, Thiault, Lauric, Vains, Jason, Wachenfeld, David, Weekers, Damien, Williams, Genevieve, and Mumby, Peter J. (2020) Priority species to support the functional integrity of coral reefs. Oceanography and Marine Biology: an annual review, 58. pp. 179-318.

Whitman, Taylor N., Negri, Andrew P., Bourne, David G., and Randall, Carly J. (2020) Settlement of larvae from four families of corals in response to a crustose coralline alga and its biochemical morphogens. Scientific Reports, 10. 16397.

Frade, Pedro R., Glasl, Bettina, Matthews, Samuel A., Mellin, Camille, Serrão, Ester A., Wolfe, Kennedy, Mumby, Peter J., Webster, Nicole S., Bourne, David G., and UNSPECIFIED (2020) Spatial patterns of microbial communities across surface waters of the Great Barrier Reef. Communications Biology, 3. 442.

Morgans, Carys A., Hung, Julia Y., Bourne, David G., and Quigley, Kate M. (2020) Symbiodiniaceae probiotics for use in bleaching recovery. Restoration Ecology, 28 (2). pp. 282-288.

Wada, Naohisa, Ishimochi, Mizuki, Matsui, Taeko, Pollock, F. Joseph, Tang, Sen-Lin, Ainsworth, Tracy D., Willis, Bette L., Mano, Nobuhiro, and Bourne, David G. (2019) Characterization of coral-associated microbial aggregates (CAMAs) within tissues of the coral Acropora hyacinthus. Scientific Reports, 9. 14662.

Peixoto, Raquel S., Sweet, Michael, and Bourne, David G. (2019) Customized medicine for corals. Frontiers in Marine Science, 6. 686.

Glasl, Bettina, Smith, Caitlin E., Bourne, David G., and Webster, Nicole S. (2019) Disentangling the effect of host-genotype and environment on the microbiome of the coral Acropora tenuis. PeerJ, 7. e6377.

Jensen, Sigmund, Hovland, Martin, Lynch, Michael D.J., and Bourne, David G. (2019) Diversity of deep-water coral-associated bacteria and comparison across depth gradients. FEMS Microbiology Ecology, 95 (7). fiz091.

O'Brien, Paul, Webster, Nicole S., Miller, David J., and Bourne, David G. (2019) Host-microbe coevolution: applying evidence from model systems to complex marine invertebrate holobionts. mBio, 10 (1). e02241-18.

Rosado, Phillipe M., Leite, Deborah C.A., Duarte, Gustavo A.S., Chaloub, Ricardo M., Jospin, Guillaume, Nunes da Rocha, Ulisses, Saraiva, João P., Dini-Andreote, Francisco, Eisen, Jonathan A., Bourne, David G., and Peixoto, Raquel S. (2019) Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation. ISME Journal: multidisciplinary journal of microbial ecology, 13. pp. 921-936.

Glasl, Bettina, Bourne, David G., Frade, Pedro R., Thomas, Torsten, Schaffelke, Britta, and Webster, Nicole S. (2019) Microbial indicators of environmental perturbations in coral reef ecosystems. Microbiome, 7. 94.

Morris, Luke A., Voolstra, Christian R., Quigley, Kate M., Bourne, David G., and Bay, Line K. (2019) Nutrient availability and metabolism Affect the stability of coral–Symbiodiniaceae symbioses. Trends in Microbiology, 27 (8). pp. 678-689.

Pollock, F. Joseph, Lamb, Joleah B., van de Water, Jeroen A. J. M., Smith, Hillary A., Schaffelke, Britta, Willis, Bette L., and Bourne, David G. (2019) Reduced diversity and stability of coral-associated bacterial communities and suppressed immune function precedes disease onset in corals. Royal Society Open Science, 6 (6). 190355.

Jaspers, Cornelia, Fraune, Sebastian, Arnold, A. Elizabeth, Miller, David J., Bosch, Thomas C.G., Voolstra, Christian R., Adamska, Maja, Ainsworth, Tracy, Ball, Eldon, Boote, Chlöe, Bourne, David, Butterfield, Nicholas J., Chan, Cheong Xin, Cooke, Ira, Cowman, Peter F., Darling, Aaron, Davy, Simon K., Mohamed, Amin, Fabricius, Katharina, Valero Fortunato, Sofia V., Hernandez Agreda, Alejandra, Hoogenboom, Mia, Moya, Aurelie, Pita, Lucia, Ragan, Mark A., Robbins, Steven J., Andrade Rodriguez, Natalia R., Sakamaki, Kazuhiro, Schoepf, Verena, Seemann, Thorsten, Shinzato, Chuya, Stolarski, Jarosław, Strugnell, Jan, Takahashi, Shunichi, Tang, Sen-Lin, Webster, Nicole N, Whitelaw, Brooke, and Ying, Hua (2019) Resolving structure and function of metaorganisms through a holistic framework combining reductionist and integrative approaches. Zoology, 133. pp. 81-87.

Aguilar, Catalina, Raina, Jean-Baptiste, Fôret, Sylvain, Hayward, David C., Lapeyre, Bruno, Bourne, David G., and Miller, David J. (2019) Transcriptomic analysis reveals protein homeostasis breakdown in the coral Acropora millepora during hypo-saline stress. BMC Genomics, 20. 148.

Brodnicke, O. B., Bourne, D. G., Heron, S. F., Pears, R. J., Stella, J. S., Smith, H. A., and Willis, B. L. (2019) Unravelling the links between heat stress, bleaching and disease: fate of tabular corals following a combined disease and bleaching event. Coral Reefs, 38. pp. 591-603.

Robbins, Steven J., Singleton, Caitlin M., Chan, Cheong Xin, Messer, Lauren F., Geers, Aileen U., Ying, Hua, Baker, Alexander, Bell, Sara C., Morrow, Kathleen M., Ragan, Mark A., Miller, David J., Forêt, Sylvain, Voolstra, Christian R., Tyson, Gene W., Bourne, David G., Ball, Eldon, Beeden, Roger, Berumen, Michael, Aranda, Manuel, Ravasi, Timothy, Bongaerts, Pim, Hoegh-Guldberg, Ove, Cooke, Ira, Leggat, Bill, Sprungala, Susanne, Fitzgerald, Anna, Shang, Catherine, Lundgren, Petra, Fyffe, Theresa, Rubino, Francesco, van Oppen, Madeleine, Weynberg, Karen, and Bells, Sara C. (2019) A genomic view of the reef-building coral Porites lutea and its microbial symbionts. Nature Microbiology, 4 (12). pp. 2090-2100.

Barton, Jonathan A., Hutson, Kate S., Bourne, David G., Humphrey, Craig, Dybala, Cat, and Rawlinson, Kate A. (2019) The life cycle of the Acropora coral-eating flatworm (AEFW), Prosthiostomum acroporae; the influence of temperature and management guidelines. Frontiers in Marine Science, 6. 524.

West, Annie G., Waite, David W., Deines, Peter, Bourne, David G., Digby, Andrew, McKenzie, Valerie J., and Taylor, Michael W. (2019) The microbiome in threatened species conservation. Biological Conservation, 229. pp. 85-98.

van de Water, Jeroen A.J.M., Chaib de Mares, Maryam, Dixon, Groves B., Raina, Jean-Baptiste, Willis, Bette L., Bourne, David G., and van Oppen, Madeleine J.H. (2018) Antimicrobial and stress responses to increased temperature and bacterial pathogen challenge in the holobiont of a reef-building coral. Molecular Ecology, 27 (4). pp. 1065-1080.

Pollock, F. Joseph, McMinds, Ryan, Smith, Styles, Bourne, David G., Willis, Bette L., Medina, Mónica, Thurber, Rebecca Vega, and Zaneveld, Jesse R. (2018) Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny. Nature Communications, 9. 4921. pp. 1-13.

Hoj, Lone, Levy, Natalie, Baillie, Brett K., Clode, Peta L., Strohmaier, Raphael C., Siboni, Nachshon, Webster, Nicole S., Uthicke, Sven, and Bourne, David G. (2018) Crown-of-thorns sea star Acanthaster cf. solaris has tissue-characteristic microbiomes with potential roles in health and reproduction. Applied and Environmental Microbiology, 84 (13).

Torda, Gergely, Sambrook, Katie, Cross, Peter, Sato, Yui, Bourne, David G., Lukoschek, Vimoksalehi, Hill, Tessa, Torras Jorda, Georgina, Moya, Aurelie, and Willis, Bette L. (2018) Decadal erosion of coral assemblages by multiple disturbances in the Palm Islands, central Great Barrier Reef. Scientific Reports, 8. 11885. pp. 1-10.

Mera, Hanaka, and Bourne, David G. (2018) Disentangling causation: complex roles of coral-associated microorganisms in disease. Environmental Microbiology, 20 (2). pp. 431-449.

Sato, Yui, Bell, Sara C., Nichols, Cassandra, Fry, Kent, Menéndez, Patricia, and Bourne, David G. (2018) Early-phase dynamics in coral recovery following cyclone disturbance on the inshore Great Barrier Reef, Australia. Coral Reefs, 37 (2). pp. 431-443.

O'Brien, Paul A., Smith, Hillary A., Fallon, Stewart, Fabricius, Katharina, Willis, Bette L., Morrow, Kathleen M., and Bourne, David G. (2018) Elevated CO2 has little influence on the bacterial communities associated with the pH-tolerant coral, massive Porites spp. Frontiers in Microbiology, 9. 2621.

Glasl, Bettina, Smith, Caitlin E., Bourne, David G., and Webster, Nicole S. (2018) Exploring the diversity-stability paradigm using sponge microbial communities. Scientific Reports, 8. 8425.

Ceccarelli, Daniela M., Loffler, Zoe, Bourne, David G., Al Moajil-Cole, Grace S., Boström Einarsson, Lisa, Evans-Illidge, Elizabeth, Fabricius, Katharina, Glasl, Bettina, Marshall, Paul, McLeod, Ian, Read, Mark, Schaffelke, Britta, Smith, Adam K., Jorda, Georgina T., Williamson, David H., and Bay, Line (2018) Rehabilitation of coral reefs through removal of macroalgae: state of knowledge and considerations for management and implementation. Restoration Ecology, 26 (5). pp. 827-838.

Liu, Huanle, Stephens, Timothy G., González-Pech, Raúl A., Beltran, Victor H., Lapeyre, Bruno, Bongaerts, Pim, Cooke, Ira, Aranda, Manuel, Bourne, David G., Forêt, Sylvain, Miller, David J., van Oppen, Madeleine J.H., Voolstra, Christian R., Ragan, Mark A., and Chan, Cheong Xin (2018) Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis. Communications Biology, 1. 95.

Peixoto, Raquel S., Rosado, Phillipe M., de Assis Leite, Deborah Catharine, Rosado, Alexandre S., and Bourne, David G. (2017) Beneficial microorganisms for corals (BMC): proposed mechanisms for coral health and resilience. Frontiers in Microbiology, 8. 341.

Morrow, Kathleen M., Bromhall, Katrina, Motti, Cherie A., Munn, Colin B., and Bourne, David G. (2017) Allelochemicals produced by brown macroalgae of the Lobophora Genus are active against coral larvae and associated bacteria, supporting pathogenic shifts to vibrio dominance. Applied and Environmental Microbiology, 83 (1). pp. 1-19.

Pollock, F. Joseph, Katz, Sefano M., van de Water, Jeroen A.J.M., Davies, Sarah W., Hein, Margaux, Torda, Gergely, Matz, Mikhail V., Beltran, Victor H., Buerger, Patrick, Puill-Stephan, Eneour, Abrego, David, Bourne, David G., and Willis, Bette L. (2017) Coral larvae for restoration and research: a large-scale method for rearing Acropora millepora larvae, inducing settlement, and establishing symbiosis. PeerJ, 5. e3732.

Neave, Matthew J., Rachmawati, Rita, Xun, Liping, Michell, Craig T., Bourne, David G., Apprill, Amy, and Voolstra, Christian R. (2017) Differential specificity between closely related corals and abundant Endozoicomonas endosymbionts across global scales. ISME Journal: multidisciplinary journal of microbial ecology, 11 (1). pp. 186-200.

Marcelino, Vanessa Rossetto, Morrow, Kathleen M., van Oppen, Madeleine J.H., Bourne, David G., and Verbruggen, Heroen (2017) Diversity and stability of coral endolithic microbial communities at a naturally high p CO2 reef. Molecular Ecology, 26 (19). pp. 5344-5357.

Glasl, Bettina, Bourne, David G., Frade, Pedro R., and Webster, Nicole S. (2017) Establishing microbial baselines to identify indicators of coral reef health. Microbiology Australia, 39 (1). pp. 42-46.

Glasl, Bettina, Webster, Nicole S., and Bourne, David G. (2017) Microbial indicators as a diagnostic tool for assessing water quality and climate stress in coral reef ecosystems. Marine Biology, 164. 91.

Silveira, Cynthia B., Cavalcanti, Giselle S., Walter, Juline M., Silva-Lima, Arthur W., Dinsdale, Elizabeth, Bourne, David G., Thompson, Cristiane C., and Thompson, Fabiano L. (2017) Microbial processes driving coral reef organic carbon flow. FEMS Microbiology Reviews, 41 (4). pp. 575-595.

Chen, Carla C.M., Bourne, David G., Drovandi, Christopher C., Mengersen, Kerrie, Willis, Bette L., Caley, M. Julian, and Sato, Yui (2017) Modelling environmental drivers of black band disease outbreaks in populations of foliose corals in the genus Montipora. PeerJ, 5. e3438.

Torda, Gergely, Donelson, Jennifer M., Aranda, Manuel, Barshis, Daniel J., Bay, Line, Berumen, Michael L., Bourne, David G., Cantin, Neal, Foret, Sylvain, Matz, Mikhail, Miller, David J., Moya, Aurelie, Putnam, Hollie M., Ravasi, Timothy, van Oppen, Madeleine J.H., Vega Thurber, Rebecca, Vidal-Dupiol, Jeremie, Voolstra, Christian R., Watson, Sue-Ann, Whitelaw, Emma, Willis, Bette L., and Munday, Philip L. (2017) Rapid adaptive responses to climate change in corals. Nature Climate Change, 7. pp. 627-636.

Lamb, Joleah B., van de Water, Jeroen A.J.M., Bourne, David G., Altier, Craig, Hein, Margaux Y., Fiorenza, Evan A., Abu, Nur, Jompa, Jamaluddin, and Harvell, C. Drew (2017) Seagrass ecosystems reduce exposure to bacterial pathogens of humans, fishes, and invertebrates. Science, 355 (6326). pp. 731-733.

Raina, Jean-Baptiste, Clode, Peta L., Cheong, Soshan, Bougoure, Jeremy, Kilburn, Matt R., Reeder, Anthony, Forêt, Sylvain, Stat, Michael, Beltran, Victor, Thomas-Hall, Peter, Tapiolas, Dianne, Motti, Cherie M., Gong, Bill, Pernice, Mathieu, Marjo, Christopher E., Seymour, Justin R., Willis, Bette L., and Bourne, David G. (2017) Subcellular tracking reveals the location of dimethylsulfoniopropionate in microalgae and visualises its uptake by marine bacteria. eLife, 6.

Aguilar, Catalina, Raina, Jean-Baptiste, Motti, Cherie A., Foret, Sylvain, Hayward, David C., Lapeyre, Bruno, Bourne, David G., and Miller, David J. (2017) Transcriptomic analysis of the response of Acropora millepora to hypo-osmotic stress provides insights into DMSP biosynthesis by corals. BMC Genomics, 18. 612.

Sato, Yui, Ling, Edmund Y.S., Turaev, Dmitrij, Laffy, Patrick, Weynberg, Karen D., Rattei, Thomas, Willis, Bette L., and Bourne, David G. (2017) Unraveling the microbial processes of black band disease in corals through integrated genomics. Scientific Reports, 7. 40455.

Pollock, F. Joseph, Wada, Naoisha, Torda, Gergely, Willis, Bette L., and Bourne, David G. (2017) White syndrome-affected corals have a distinct microbiome at disease lesion fronts. Applied and Environmental Microbiology, 83 (2). e02799-16. pp. 1-15.

Wessels, Wiebke, Sprungala, Susanne, Watson, Sue-Ann, Miller, David J., and Bourne, David G. (2017) The microbiome of the octocoral Lobophytum pauciflorum: minor differences between sexes and resilience to short-term stress. FEMS Microbiology Ecology, 93 (5). pp. 1-13.

O'Brien, Paul A., Morrow, Kathleen M., Willis, Bette L., and Bourne, David G. (2016) Implications of ocean acidification for marine microorganisms from the free-living to the host-associated. Frontiers in Marine Science, 3. 47. pp. 1-14.

Shein, Karsten, Loder, Jennifer, Bourne, David G., and Galvis, Nohora (2016) Citizen Science: the next big leap. In: Proceedings of the 13th International Coral Reef Symposium. pp. 590-598. From: 13th International Coral Reef Symposium, 19-24 June 2016, Honolulu, HI, USA.

Angly, Florent E., Pantos, Olga, Morgan, Thomas C., Rich, Virginia, Tonin, Hemerson, Bourne, David G., Mercurio, Philip, Negri, Andrew P., and Tyson, Gene W. (2016) Diuron tolerance and potential degradation by pelagic microbiomes in the Great Barrier Reef lagoon. PeerJ, 4. e1758. pp. 1-23.

Lema, Kimberley A., Clode, Peta L., Kilburn, Matt R., Thornton, Ruth, Willis, Bette L., and Bourne, David G. (2016) Imaging the uptake of nitrogen-fixing bacteria into larvae of the coral Acropora millepora. ISME Journal, 10 (7). pp. 1804-1808.

Wada, Naohisa, Pollock, Frederic J., Willis, Bette L., Ainsworth, Tracy, Mano, Nobuhiro, and Bourne, David G. (2016) In situ visualization of bacterial populations in coral tissues: pitfalls and solutions. PeerJ, 4. e2424.

Bourne, David G., Morrow, Kathleen M., and Webster, Nicole S. (2016) Insights into the coral microbiome: underpinning the health and resilience of reef ecosystems. Annual Review of Microbiology, 70. pp. 317-340.

Sato, Yui, Civiello, Michael, Bell, Sara C., Willis, Bette L., and Bourne, David G. (2016) Integrated approach to understanding the onset and pathogenesis of black band disease in corals. Environmental Microbiology, 18 (3). pp. 752-765.

Raina, Jean-Baptiste, Tapiolas, Dianne, Motti, Cherie A., Foret, Sylvain, Seemann, Torsten, Tebben, Jan, Willis, Bette L., and Bourne, David G. (2016) Isolation of an antimicrobial compound produced by bacteria associated with reef-building corals. PeerJ, 4. e2275. pp. 1-20.

Angly, Florent E., Heath, Candice, Morgan, Thomas C., Tonin, Hemerson, Rich, Virginia, Schaffelke, Britta, Bourne, David G., and Tyson, Gene W. (2016) Marine microbial communities of the Great Barrier Reef lagoon are influenced by riverine floodwaters and seasonal weather events. PeerJ, 4. e1511. pp. 1-24.

Camps, Mercedes, Benavides, Mar, Lema, Kimberley A., Bourne, David G., Grosso, Olivier, and Bonnet, Sophie (2016) Released coral mucus does not enhance planktonic N2 fixation rates. Aquatic Microbial Ecology, 77 (1). pp. 51-63.

Mohamed, A.R., Cumbo, V., Harii, S., Shinzato, C., Chan, C.X., Ragan, M.A., Bourne, D.G., Willis, B.L., Ball, E.E., Satoh, N., and Miller, D.J. (2016) The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome. Molecular Ecology, 25 (13). pp. 3127-3141.

Pollock, F. Joseph, Krediet, Cory J., Garren, Melissa, Stocker, Roman, Winn, Karina, Wilson, Bryan, Huete-Stauffer, Carla, Willis, Bette L., and Bourne, David G. (2015) Visualization of coral host-pathogen interactions using a stable GFP-labeled Vibrio coralliilyticus strain. Coral Reefs, 34 (2). pp. 655-662.

van de Water, Jeroen A.J.M., Lamb, Joleah B., van Oppen, Madeleine J.H., Willis, Bette L., and Bourne, David G. (2015) Comparative immune responses of corals to stressors associated with offshore reef-based tourist platforms. Conservation Physiology, 3 (1). cov032.

van De Water, Jeroen A.J.M., Leggat, William, Bourne, David G., Van Oppen, Madeleine J.H., Willis, Bette L., and Ainsworth, Tracy D. (2015) Elevated seawater temperatures have a limited impact on the coral immune response following physical damage. Hydrobiologia, 759 (1). pp. 201-214.

Alongi, Daniel, Patten, Nicole E., Mckinnon, David, Köstner, Nicole, Bourne, David G., and Brinkman, Richard (2015) Phytoplankton, bacterioplankton and virioplankton structure and function across the southern Great Barrier Reef shelf. Journal of Marine Systems, 142. pp. 25-39.

Voolstra, Christian R., Miller, David J., Ragan, Mark A., Hoffmann, Ary A., Hoegh-Guldberg, Ove, Bourne, David G., Ball, Eldon E., Ying, Hua, Forêt, Sylvain, Takahashi, Shunichi, Weynberg, Karen D., Van Oppen, Madeleine J.H., Morrow, Kathleen, Chan, Cheong Xin, Rosic, Nedeljka, Leggat, William, Sprungala, Susanne, Imelfort, Michael, Tyson, Gene W., Kassahn, Karin S., Lundgren, Petra, Beeden, Roger J., Ravasi, Timothy, Berumen, Michael L., Abal, Eva, and Fyffe, Theresa (2015) The ReFuGe 2020 Consortium: using "omics" approaches to explore the adaptability and resilience of coral holobionts to environmental change. Frontiers in Marine Science, 2. 68. pp. 1-8.

Bourne, D.G., Ainsworth, T.D., Pollock, F.J., and Willis, B.L. (2015) Towards a better understanding of white syndromes and their causes on Indo-Pacific coral reefs. Coral Reefs, 34 (1). pp. 233-242.

Ainsworth, Tracy D., Krause, Lutz, Bridge, Thomas, Torda, Gergely, Raina, Jean-Baptiste, Zakrzewski, Martha, Gates, Ruth D., Padilla-Gamino, Jacqueline L., Spalding, Heather L., Smith, Celia, Woolsey, Erika S., Bourne, David G., Bongaerts, Pim, Hoegh-Guldberg, Ove, and Leggat, Bill (2015) The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts. ISME Journal: multidisciplinary journal of microbial ecology, 9. pp. 2261-2274.

van de Water, A.J.M., Ainsworth, Tracy D., Leggat, William, Bourne, David G., Willis, Bette L., and Van Oppen, Madeleine J.H. (2015) The coral immune response facilitates protection against microbes during tissue regeneration. Molecular Ecology, 24 (13). pp. 3390-3404.

Lema, Kimberley A., Willis, Bette L., and Bourne, David G. (2014) Amplicon pyrosequencing reveals spatial and temporal consistency in diazotroph assemblages of the Acropora millepora microbiome. Environmental Microbiology, 16 (10). pp. 3345-3359.

Pollock, F. Joseph, Lamb, Joleah B., Field, Stuart N., Heron, Scott F., Schaffelke, Britta, Shedrawi, George, Bourne, David G., and Willis, Bette L. (2014) Sediment and turbidity associated with offshore dredging increase coral disease prevalence on nearby reefs. PLoS ONE, 9 (7). e102498. pp. 1-9.

Pollock, F. Joseph, Wood-Charlson, Elisha M., van Oppen, Madeleine J.H., Bourne, David G., Willis, Bette L., and Weynberg, Karen D. (2014) Abundance and morphology of virus-like particles associated with the coral Acropora hyacinthus differ between healthy and white syndrome-infected states. Marine Ecology - Progress Series, 510. pp. 39-43.

Katz, Sefano M., Pollock, F. Joseph, Bourne, D.G., and Willis, Bette L. (2014) Crown-of-thorns starfish predation and physical injuries promote brown band disease on corals. Coral Reefs, 33 (3). pp. 705-716.

Morrow, Kathleen M., Bourne, David G., Humphrey, Craig, Botté, Emmanuelle S., Laffy, Patrick, Zaneveld, Jesse, Uthicke, Sven, Fabricius, Katharina E., and Webster, Nicole S. (2014) Natural volcanic CO2 seeps reveal future trajectories for host-microbial associations in corals and sponges. ISME Journal: multidisciplinary journal of microbial ecology, 9 (4). pp. 894-908.

Lema, Kimberley A., Bourne, David G., and Willis, Bette L. (2014) Onset and establishment of diazotrophs and other bacterial associates in the early life history stages of the coral Acropora millepora. Molecular Ecology, 23 (19). pp. 4682-4695.

Laczka, Olivier F., Labbate, Maurizio, Seymour, Justin R., Bourne, David G., Fielder, Stewart S., and Doblin, Martina A. (2014) Surface immuno-functionalisation for the capture and detection of vibrio species in the marine environment: a new management tool for industrial facilities. PLoS One, 9 (10). e108387.

Garren, Melissa, Son, Kwangmin, Raina, Jean-Baptiste, Rusconi, Roberto, Menolascina, Filippo, Shapiro, Orr H., Tout, Jessica, Bourne, David G., Seymour, Justin R., and Stocker, Roman (2014) A bacterial pathogen uses dimethylsulfoniopropionate as a cue to target heat-stressed corals. ISME Journal, 8. pp. 999-1007.

Sato, Yui, Willis, Bette L., and Bourne, David G. (2013) Pyrosequencing-based profiling of archaeal and bacterial 16S rRNA genes identifies a novel archaeon associated with black band disease in corals. Environmental Microbiology, 15 (11). pp. 2994-3007.

Raina, Jean-Baptiste, Tapiolas, Dianne M., Foret, Sylvain, Lutz, Adrian, Abrego, David, Ceh, Janja, Seneca, Francois O., Clode, Peta L., Bourne, David G., Willis, Bette L., and Motti, Cherie A. (2013) DMSP biosynthesis by an animal and its role in coral thermal stress response. Nature, 502 (7473). pp. 677-691.

Bourne, David G., van der Zee, Marc J.J., Botté, Emmanuelle S., and Sato, Yui (2013) Sulfur-oxidizing bacterial populations within cyanobacterial dominated coral disease lesions. Environmental Microbiology Reports, 5 (4). pp. 518-524.

Cohen, Yossi, Pollock, F. Joseph, Rosenberg, Eugene, and Bourne, David G. (2013) Phage therapy treatment of the coral pathogen Vibrio coralliilyticus. MicrobiologyOpen, 2 (1). pp. 64-74.

Bourne, David G., Dennis, Paul G., Uthicke, Sven, Soo, Rochelle M., Tyson, Gene W., and Webster, Nicole (2013) Coral reef invertebrate microbiomes correlate with the presence of photosymbionts. ISME Journal: multidisciplinary journal of microbial ecology, 7. pp. 1452-1458.

Pollock, F.J., Katz, S.M., Bourne, D.G., and Willis, B.L. (2013) Cymo melanodactylus crabs slow progression of white syndrome lesions on corals. Coral Reefs, 32 (1). pp. 43-48.

Ceh, Janja, van Kiulen, Mike, and Bourne, David G. (2013) Intergenerational transfer of specific bacteria in corals and possible implications for offspring fitness. Microbial Ecology, 65 (1). pp. 227-231.

Ceh, Janja, Kilburn, Matt R., Cliff, John B., Raina, Jean-Baptiste, van Keulen, Mike, and Bourne, David G. (2013) Nutrient cycling in early coral life stages: Pocillopora damicornis larvae provide their algal symbiont (Symbiodinium) with nitrogen acquired from bacterial associates. Ecology and Evolution, 3 (8). pp. 2393-2400.

Brown, Tanya, Bourne, David, and Rodriguez-Lanetty, Mauricio (2013) Transcriptional activation of c3 and hsp70 as part of the immune response of Acropora millepora to bacterial challenges. PLoS One, 8 (7). e67246.

Winn, Karina M., Bourne, David G., and Mitchell, James G. (2013) Vibrio coralliilyticus search patterns across an oxygen gradient. PLoS One, 8 (7). e67975.

Wilson, Bryan, Muirhead, Andrew, Bazanella, Monika, Huete-Stauffer, Carla, Vezzulli, Luigi, and Bourne, David G. (2013) An improved detection and quantification method for the coral pathogen Vibrio coralliilyticus. PLoS One, 8 (12). e81800.

Glas, Martin S., Sato, Yui, Ulstrup, Karin E., and Bourne, David G. (2012) Biogeochemical conditions determine virulence of black band disease in corals. ISME Journal: multidisciplinary journal of microbial ecology, 6 (8). pp. 1526-1534.

Ceh, Janja, Raina, Jean-baptiste, Soo, Rochelle M., van Keulen, Mike, and Bourne, David G. (2012) Coral-bacterial communities before and after a coral mass spawning event on Ningaloo Reef. PLoS One, 7 (5). pp. 1-7.

Lema, Kimberley A., Willis, Bette L., and Bourne, David G. (2012) Corals form characteristic associations with symbiotic nitrogen-fixing bacteria. Applied and Environmental Microbiology, 78 (9). pp. 3136-3144.

Jensen, Sigmund, Bourne, David G., Hovland, Martin, and Murrell, J. Colin (2012) High diversity of microplankton surrounds deep-water coral reef in the Norwegian Sea. FEMS Microbiology Ecology, 82 (1). pp. 75-89.

Stat, Michael, Baker, Andrew C., Bourne, David G., Correa, Adrienne M.S., Forsman, Zac, Huggett, Megan J., Pochon, Xavier, Skillings, Derek, Toonen, Robert J., van Oppen, Madeleine J.H., and Gates, Ruth D. (2012) Molecular delineation of species in the coral holobiont. Advances in Marine Biology, 63. pp. 1-65.

Goulden, Evan F., Hall, Michael R., Bourne, David G., Pereg, Lily L., and Høj, Lone (2012) Pathogenicity and infection cycle of Vibrio owensii in larviculture of the ornate spiny lobster (Panulirus ornatus). Applied and Environmental Microbiology, 78 (8). pp. 2841-2849.

Littman, Raechel, Willis, Bette L., and Bourne, David G. (2011) Metagenomic analysis of the coral holobiont during a natural bleaching event on the Great Barrier Reef. Environmental Microbiology Reports, 3 (6). pp. 651-660.

Pollock, F. Joseph, Morris, Pamela J., Willis, Bette L., and Bourne, David G. (2011) The urgent need for robust coral disease diagnostics. PLoS Pathogens, 7 (10). e1002183. pp. 1-10.

Sato, Y., Bourne, D.G., and Willis, B.L. (2011) Effects of temperature and light on the progression of black band disease on the reef coral, Montipora hispida. Coral Reefs, 30 (3). pp. 753-761.

Bourne, David G, Muirhead, Andrew, and Sato, Yui (2011) Changes in sulfate-reducing bacterial populations during the onset of black band disease. ISME Journal: multidisciplinary journal of microbial ecology, 5 (3). 559- 564.

Haapkylä, Jessica, Unsworth, Richard K.F., Flavell, Mike, Bourne, David G., Schaffelke, Britta, and Willis, Bette L. (2011) Seasonal rainfall and runoff promote coral disease on an inshore reef. PLoS ONE, 6 (2). e16893. pp. 1-10.

Aeby, G.S., Bourne, D.G., Wilson, B., and Work, T.M. (2011) Coral diversity and the severity of disease outbreaks: a cross-regional comparison of Acropora White Syndrome in a species-rich region (American Samoa) with a species-poor region (Northwestern Hawaiian Islands). Journal of Marine Biology, 2011. 490198.

Ceh, Janja, van Keulen, Mike, and Bourne, David G. (2011) Coral-associated bacterial communities on Ningaloo Reef, Western Australia. FEMS Microbiology Ecology, 75 (1). pp. 134-144.

Koenig, Jeremy E., Bourne, David G., Curtis, Bruce, Dlutek, Marlena, Stokes, H.W., Doolittle, W. Ford, and Boucher, Yan (2011) Coral-mucus-associated Vibrio integrons in the Great Barrier Reef: genomic hotspots for environmental adaptation. ISME Journal: multidisciplinary journal of microbial ecology, 5 (6). pp. 962-972.

Santos, Eidy de O, Alves, Nelson, Dias, Graciela M., Mazotto, Ana Maria, Vermelho, Alane, Vora, Gary J., Wilson, Bryan, Beltran, Victor H., Bourne, David G., Le Roux, Frederique, and Thompson, Fabiano L. (2011) Genomic and proteomic analyses of the coral pathogen Vibrio coralliilyticus reveal a diverse virulence repertoire. ISME Journal: multidisciplinary journal of microbial ecology, 5 (9). pp. 1471-1483.

Pollock, F. Joseph, Morris, Pamela J., Willis, Bette L., and Bourne, David G. (2010) Detection and quantification of the coral pathogen vibrio coralliilyticus by real-time PCR with TaqMan fluorescent probes. Applied and Environmental Microbiology, 76 (15). pp. 5282-5286.

Glas, Martin S., Motti, Cherie A., Negri, Andrew P., Sato, Yui, Froscio, Suzanne, Humpage, Andrew R., Krock, Bernd, Cembella, Allan, and Bourne, David G (2010) Cyanotoxins are not implicated in the etiology of coral black band disease outbreaks on Pelorus Island, Great Barrier Reef. FEMS Microbiology Ecology, 73 (1). pp. 43-54.

Crothers-Stomps, C., Høj, L., Bourne, D.G., Hall, M.R., and Owens, L. (2010) Isolation of lytic bacteriophage against Vibrio harveyi. Journal of Applied Microbiology, 108 (5). pp. 1744-1750.

Littman, Raechel A., Bourne, David G., and Willis, Bette L. (2010) Responses of coral-associated bacterial communities to heat stress differ with Symbiodinium type on the same coral host. Molecular Ecology, 19 (9). pp. 1978-1990.

Raina, Jean-Baptiste, Dinsdale, Elizabeth A., Willis, Bette L., and Bourne, David G. (2010) Do the organic sulfur compounds DMSP and DMS drive coral microbial associations? Trends in Microbiology, 18 (3). pp. 101-108.

Pollock, F. Joseph, Wilson, Bryan, Johnson, Wesley R., Morris, Pamela J., Willis, Bette L., and Bourne, David G. (2010) Phylogeny of the coral pathogen Vibrio coralliilyticus. Environmental Microbiology Reports, 2 (1). pp. 172-178.

Sato, Yui, Willis, Bette L., and Bourne, David G. (2010) Successional changes in bacterial communities during the development of black band disease on the reef coral, Montipora hispida. ISME Journal, 4 (2). pp. 203-214.

Vezzulli, Luigi, Previati, Monica, Pruzzo, Carla, Marchese, Anna, Bourne, David G., Cerrano, Carlo, and VibrioSea Consortium (2010) Vibrio infections triggering mass mortality events in a warming Mediterranean Sea. Environmental Microbiology, 12 (7). pp. 2007-2019.

Sato, Yui, Bourne, David G., and Willis, Bette L. (2009) Dynamics of seasonal outbreaks of black band disease in an assemblage of Montipora species at Pelorus Island (Great Barrier Reef, Australia). Proceedings of the Royal Society of London Series B, 276. pp. 2795-2803.

Raina, Jean-Baptiste, Tapiolas, Dianne, Willis, Bette L., and Bourne, David G. (2009) Coral-associated bacteria and their role in the biogeochemical cycling of sulfur. Applied and Environmental Microbiology, 75 (11). pp. 3492-3501.

Littman, Raechel A., Willis, Bette L., Pfeffer, Christian, and Bourne, David G. (2009) Diversities of coral-associated bacteria differ with location, but not species, for three acroporid corals on the Great Barrier Reef. FEMS Microbiology Ecology, 68 (2). pp. 152-163.

Sussman, Meir, Mieog, Jos C., Doyle, Jason R., Victor, Steven, Willis, Bette L., and Bourne, David G. (2009) Vibrio Zinc-Metalloprotease causes photoinactivation of coral endosymbionts and coral tissue lesions. PLoS ONE, 4 (2). p. 4511.

Cano-Gómez, Ana, Bourne, David G., Hall, Michael R., Owens, Leigh, and Høj, Lone (2009) Molecular identification, typing and tracking of Vibrio harveyi in aquaculture systems: current methods and future prospects. Aquaculture, 287 (1-2). pp. 1-10.

Littman, Raechel A., Willis, Bette L., and Bourne, David G. (2009) Bacterial communities of juvenile corals infected with different Symbiodinium (dinoflagellate) clades. Marine Ecology Progress Series, 389. pp. 45-59.

Hoj, Lone, Bourne, David G., and Hall, Michael R. (2009) Localization, abundance and community structure of bacteria associated with Artemia: effects of nauplii enrichment and antimicrobial treatment. Aquaculture, 293 (3-4). pp. 278-285.

Bourne, David G., Garren, Melissa, Work, Thierry M., Rosenberg, Eugene, Smith, Garriet W., and Harvell, C. Drew (2009) Microbial disease and the coral holobiont. Trends in Microbiology, 17 (12). pp. 554-562.

Wasmund, Kenneth, Kurtböke, D. Ipek, Burns, Kathryn A., and Bourne, David G. (2009) Microbial diversity in sediments associated with a shallow methane seep in the tropical Timor Sea of Australia reveals a novel aerobic methanotroph diversity. FEMS Microbiology Ecology, 68 (2). pp. 142-151.

Castine, Sarah A., Bourne, David G., Trott, Lindsay A., and Mckinnon, David A. (2009) Sediment microbial community analysis: establishing impacts of aquaculture on a tropical mangrove ecosystem. Aquaculture, 297 (1-4). pp. 91-98.

Sussman, Meir, Willis, Bette L., Victor, Steven, and Bourne, David G. (2008) Coral pathogens identified for white syndrome (WS) epizootics in the Indo-Pacific. Public Library of Science ONE , 3 (6). pp. 1-14.

Bourne, David G., Boyett, Holly V., Henderson, Meegan E., Muirhead, Andrew, and Willis, Bette L. (2008) Identification of a ciliate (Oligohymenophorea: Scuticociliatia) associated with brown band disease on corals of the Great Barrier Reef. Applied and Environmental Microbiology, 74 (3). pp. 883-888.

Bourne, David, Iida, Yuki, Uthicke, Sven, and Smith-Keune, Carolyn (2008) Changes in coral-associated microbial communities during a bleaching event. ISME Journal: multidisciplinary journal of microbial ecology, 2. pp. 350-363.

Payne, M.S., Høj, L., Hall, M.R., Sly, L., and Bourne, D.G. (2008) Microbial diversity of mid-stage palinurid phyllosoma from great barrier reef waters. Journal of Applied Microbiology, 105 (2). pp. 340-350.

Anthony, S.L., Page, C.A., Bourne, D.G., and Willis, B.L. (2008) Newly characterized distinct phases of the coral disease 'atramentous necrosis' on the Great Barrier Reef. Diseases of Aquatic Organisms, 81 (3). pp. 255-259.

Boyett, Holly V., Bourne, David G., and Willis, Bette L. (2007) Elevated temperature and light enhance progression and spread of black band disease on staghorn corals of the Great Barrier Reef. Marine Biology, 151 (5). pp. 1711-1720.

Motti, Cherie A., Bourne, David, Burnell, James N., Doyle, Jason R., Haines, Dianne S., Liptrot, Catherine H., Llewellyn, Lyndon E., Ludke, Shilo, Muirhead, Andrew, and Tapiolas, Dianne M. (2007) Screening marine fungi for inhibitors of the C4 plant enzyme pyruvate phosphate dikinase: unguinol as a potential novel herbicide candidate. Applied and Environmental Microbiology, 73 (6). pp. 1921-1927.

Payne, Matthew S., Hall, Mike R., Sly, Lindsay, and Bourne, David G. (2007) Microbial diversity within early-stage cultured Panulirus ornatus phyllosomas. Applied and Environmental Microbiology, 73 (6). pp. 1940-1951.

Ulstrup, Karin E., Kühl, Michael, and Bourne, David G. (2007) Zooxanthellae harvested by ciliates associated with brown band syndrome of corals remain photosynthetically competent. Applied and Environmental Microbiology, 73 (6). pp. 1968-1975.

Payne, Matthew S., Hall, Mike R., Bannister, Raymond, Sly, Lindsay, and Bourne, David G. (2006) Microbial diversity within the water column of a larval rearing system for the ornate rock lobster (Panulirus ornatus). Aquaculture, 258 (1-4). pp. 80-90.

Sussman, Meir, Bourne, David G., and Willis, Bette L. (2006) A single cyanobacterial ribotype is associated with both red and black bands on diseased corals from Palau. Diseases of Aquatic Organisms, 69 (1). pp. 111-118.

Bourne, David G., Blakeley, Robert L., Riddles, Peter, and Jones, Gary J. (2006) Biodegradation of the cyanobacterial toxin microcystin LR in natural water and biologically active slow sand filters. Water Research, 40 (6). pp. 1294-1302.

Franklin, Marc P., Mcdonald, Ian R., Bourne, David G., Owens, Nicolas J.P., Upstill-Goddard, Robert C., and Murrell, J. Collin (2005) Bacterial diversity in the bacterioneuston (sea surface microlayer): the bacterioneuston through the looking glass. Environmental Microbiology, 7 (5). pp. 723-736.

Bourne, D.G., Blakeley, R.L., Riddles, P., and Jones, G.J. (2005) Development of polymerase chain reaction and fluorescent in situ hybridisation techniques for the detection of a bacterial strain that degrades the cyanobacterial toxin microcystin LR. Marine and Freshwater Research, 56 (8). pp. 1127-1135.

Bourne, David G., and Munn, Colin.B. (2005) Diversity of bacteria associated with the coral Pocillopora damicornis from the Great Barrier Reef. Environmental Microbiology, 7 (8). pp. 1162-1174.

Bourne, David (2005) Microbiological assessment of a disease outbreak on corals from Magnetic Island (Great Barrier Reef, Australia). Coral Reefs, 24 (2). pp. 304-312.

Thompson, F.L., Thompson, C.C., Naser, S., Hoste, B., Munn, C., Bourne, David, and Swings, J. (2005) Photobacterium rosenbergii sp nov and Enterovibrio coralii sp nov., vibrios associated with coral bleaching. International Journal of Systematic and Evolutionary Microbiology, 55. pp. 913-917.

Seymour, Justin R., Patten, Nicole, Bourne, David G., and Mitchell, James G. (2005) Spatial dynamics of virus-like particles and heterotrophic bacteria within a shallow coral reef system. Marine Ecology - Progress Series, 288. pp. 1-8.

Øvreås, Lise, Bourne, David, Sandaa, Ruth-Anne, Casamayor, Emilio O., Benlloch, Susana, Goddard, Victoria, Smerdon, Gary, Heldal, Mikal, and Thingstad, T. Frede (2003) Response of bacterial and viral communities to nutrient manipulations in seawater mesocosms. Aquatic Microbial Ecology, 31 (2). pp. 109-121.

Oakey, H.J., Levy, N., Bourne, D.G., Cullen, B.R., and Thomas, A. (2003) The use of PCR to aid in the rapid identification of Vibrio harveyi isolates. Journal of Applied Microbiology, 95 (6). pp. 1293-1303.

Joint, Ian, Henriksen, Peter, Fonnes, Gro Anita, Bourne, David, Thingstad, T. Frede, and Riemann, Bo (2002) Competition for inorganic nutrients between phytoplankton and bacterioplankton in nutrient manipulated mesocosms. Aquatic Microbial Ecology, 29 (2). pp. 145-159.

Tankéré, S.P.C., Bourne, D.G., Muller, F.L.L., and Torsvik, V. (2002) Microenvironments and microbial community structure in sediments. Environmental Microbiology, 4 (2). pp. 97-105.

Bourne, David G., Holmes, Andrew J., Iversen, Niels, and Murrell, J Colin (2000) Fluorescent oligonucleotide rDNA probes for specific detection of methane oxidising bacteria. FEMS Microbiology Ecology, 31 (1). pp. 29-38.

Bourne, David G., Jones, Gary J., Blakeley, Robert L., Jones, Alun, Negri, Andrew P., and Riddles, Peter (1996) Enzymatic pathway for the bacterial degradation of the cyanobacterial cyclic peptide toxin microcystin LR. Applied and Environmental Microbiology, 62 (11). pp. 4086-4094.